Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC016909.1-201ENST00000415916 166 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 AC069257.2-201ENST00000441819 155 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.66□□□□□ -2.14
SCN1BQ07699 RNU6-1146P-201ENST00000516282 102 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 RNA5SP481-201ENST00000516814 122 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN1BQ07699 AL590808.1-201ENST00000618696 141 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 WWP1P1-201ENST00000466609 2769 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 ZNF299P-201ENST00000406845 1804 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.65□□□□□ -2.14
SCN1BQ07699 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SCN1BQ07699 RNU1-62P-201ENST00000362599 164 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 Y_RNA.415-201ENST00000384012 112 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 Y_RNA.500-201ENST00000384466 111 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 RNU6-174P-201ENST00000410406 106 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN1BQ07699 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 RNU7-175P-201ENST00000515915 61 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 Y_RNA.682-201ENST00000516457 100 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 AC134698.4-201ENST00000523451 826 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN1BQ07699 AL590705.4-201ENST00000532209 134 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN1BQ07699 AC018638.8-201ENST00000588755 281 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 AC007014.2-201ENST00000615581 479 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 AC139792.2-201ENST00000624218 587 ntBASIC1.65□□□□□ -2.15
SCN1BQ07699 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SCN1BQ07699 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.15
SCN1BQ07699 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
SCN1BQ07699 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN1BQ07699 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN1BQ07699 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
SCN1BQ07699 Y_RNA.48-201ENST00000362710 103 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 Y_RNA.287-201ENST00000364853 94 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 SNORA72.2-201ENST00000365028 127 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 RNU6-596P-201ENST00000365395 98 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 Y_RNA.405-201ENST00000383979 100 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 Y_RNA.451-201ENST00000384200 100 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 RNU6-842P-201ENST00000384269 107 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 Y_RNA.524-201ENST00000384564 100 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 Y_RNA.561-201ENST00000384694 100 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 RNU6-331P-201ENST00000384724 107 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 RNU6-360P-201ENST00000390944 104 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 RNU6-159P-201ENST00000391080 106 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 AL356776.1-201ENST00000406574 447 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 SNORA3.2-201ENST00000408221 125 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 RN7SKP223-201ENST00000410582 62 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 AC008134.1-201ENST00000420943 193 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN1BQ07699 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN1BQ07699 AC073910.1-201ENST00000445047 438 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN1BQ07699 HSPE1P24-201ENST00000450782 238 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN1BQ07699 AP000870.1-201ENST00000472927 406 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 AC091179.3-201ENST00000474761 144 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 AC025647.1-201ENST00000517879 253 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 SNORA77B-201ENST00000578179 125 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN1BQ07699 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN1BQ07699 AC027514.1-201ENST00000588561 1603 ntBASIC1.64□□□□□ -2.15
SCN1BQ07699 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN1BQ07699 RNU6-137P-201ENST00000363680 108 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 RNU6-280P-201ENST00000364145 104 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 RNU6-793P-201ENST00000384233 104 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 RN7SKP192-201ENST00000411291 327 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 AL445646.1-201ENST00000431784 216 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN1BQ07699 RN7SKP210-201ENST00000459176 261 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 SNORA59A-201ENST00000459326 152 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 RNU6-221P-201ENST00000459541 99 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 RNU6-329P-201ENST00000459618 107 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 MTND5P5-201ENST00000503764 376 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 AC116337.1-201ENST00000509680 687 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN1BQ07699 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN1BQ07699 AC095038.3-201ENST00000634439 195 ntBASIC1.63□□□□□ -2.15
SCN1BQ07699 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SCN1BQ07699 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SCN1BQ07699 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SCN1BQ07699 RNU6-595P-201ENST00000363944 107 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 SNORA4.2-201ENST00000365313 147 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.62□□□□□ -2.15
SCN1BQ07699 Y_RNA.473-201ENST00000384333 102 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 MIR515-2-201ENST00000384883 83 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 MIR515-1-201ENST00000384884 83 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 RNA5SP323-201ENST00000391094 133 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 RNA5SP467-201ENST00000391274 118 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SCN1BQ07699 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN1BQ07699 FTH1P12-201ENST00000432137 551 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 MTND1P4-201ENST00000435196 415 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 snoU13.27-201ENST00000459278 104 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms