Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AL135790.2-201ENST00000437701 267 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFRSF9Q07011 RNU7-14P-201ENST00000459331 62 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 RNU7-66P-201ENST00000459469 62 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 RPS26P55-201ENST00000471178 356 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 MTCO1P29-201ENST00000496868 288 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 RNVU1-2-201ENST00000516326 135 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 RNU5F-4P-201ENST00000516581 114 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 DEFB131C-201ENST00000528817 165 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFRSF9Q07011 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFRSF9Q07011 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFRSF9Q07011 AC090517.1-201ENST00000569307 266 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 MIR3169-201ENST00000578032 83 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.99□□□□□ -2.25
TNFRSF9Q07011 HSPE1P19-201ENST00000603327 295 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 AC064807.4-201ENST00000607201 407 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 MIR8076-201ENST00000611401 83 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
TNFRSF9Q07011 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.99□□□□□ -2.25
TNFRSF9Q07011 AC233981.2-201ENST00000611524 1614 ntBASIC0.99□□□□□ -2.25
TNFRSF9Q07011 MTND5P9-201ENST00000503854 1755 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 Y_RNA.89-201ENST00000363031 102 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 RNU6-23P-201ENST00000363283 107 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 RNU6-438P-201ENST00000365561 103 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 SNORA18.2-201ENST00000383865 132 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 RNU6-1286P-201ENST00000383871 107 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 Y_RNA.450-201ENST00000384198 113 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 RNU6-160P-201ENST00000384591 107 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 RNU6-95P-201ENST00000384697 107 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 MIR487A-201ENST00000385009 80 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 SNORA40.6-201ENST00000391153 128 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 SNORD115-47-201ENST00000391226 86 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 MTCO3P18-201ENST00000440206 761 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 HMGN1P7-201ENST00000491722 313 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AF186996.7-201ENST00000492781 209 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AC091435.1-201ENST00000505442 584 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.98□□□□□ -2.25
TNFRSF9Q07011 Y_RNA.655-201ENST00000515919 96 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.98□□□□□ -2.25
TNFRSF9Q07011 RAB11AP2-201ENST00000545905 639 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.98□□□□□ -2.25
TNFRSF9Q07011 FGF7P1-201ENST00000582820 288 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 MIR3942-201ENST00000585264 109 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AC146944.4-201ENST00000602697 718 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AL133215.3-201ENST00000609801 448 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AL138726.1-201ENST00000614873 333 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AL136221.1-201ENST00000621449 509 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AC130454.1-201ENST00000622948 401 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AC090617.10-201ENST00000624308 134 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 AC022513.1-201ENST00000624512 117 ntBASIC0.98□□□□□ -2.25
TNFRSF9Q07011 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
TNFRSF9Q07011 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TNFRSF9Q07011 RNU6-545P-201ENST00000362681 104 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 SNORD50.1-201ENST00000362987 71 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 RNU6-534P-201ENST00000364877 106 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 SNORD31B-201ENST00000364977 69 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 RNU6-128P-201ENST00000383976 107 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 SNORA32.2-201ENST00000384049 122 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 RNU6-968P-201ENST00000384076 107 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 Y_RNA.530-201ENST00000384587 101 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 RNU6-1148P-201ENST00000410992 104 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 SNRPEP10-201ENST00000420249 274 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC139712.2-201ENST00000424302 339 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AL035666.1-201ENST00000446195 348 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC092989.1-201ENST00000481235 277 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 RPS23P5-201ENST00000495419 428 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 RNU6-256P-201ENST00000516747 97 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC016256.1-201ENST00000547971 354 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AC016727.2-201ENST00000603988 621 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TNFRSF9Q07011 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.97□□□□□ -2.25
TNFRSF9Q07011 RNU1-76P-201ENST00000362903 159 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.212-201ENST00000364177 102 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.295-201ENST00000364918 102 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 SNORD116-11-201ENST00000383882 92 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.414-201ENST00000384011 101 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.453-201ENST00000384223 109 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 RNU6-784P-201ENST00000384330 106 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 RNU6-933P-201ENST00000384424 107 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 RNU6-790P-201ENST00000384479 105 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 ZNF885P-201ENST00000420174 1098 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AL591704.2-201ENST00000421658 181 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 PCMTD1P1-201ENST00000455560 355 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms