Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIR517A-201ENST00000385001 87 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
HMGCS1Q01581 MIR1283-1-201ENST00000408494 87 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 MIR548F1-201ENST00000408667 84 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 NCOR1P3-201ENST00000420479 303 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 AC060773.1-201ENST00000421698 310 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HMGCS1Q01581 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGCS1Q01581 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.27□□□□□ -2.21
HMGCS1Q01581 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 AC007215.1-201ENST00000464893 276 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 TRBVA-201ENST00000498804 316 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 MTCO2P30-201ENST00000503662 364 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.27□□□□□ -2.21
HMGCS1Q01581 RNU6-1041P-201ENST00000516254 102 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.27□□□□□ -2.21
HMGCS1Q01581 MIR8074-201ENST00000615081 81 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 AC068205.3-201ENST00000636385 468 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 AC100810.6-201ENST00000638068 285 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
HMGCS1Q01581 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.26□□□□□ -2.21
HMGCS1Q01581 ZNF204P-201ENST00000416749 2397 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 RNU6-306P-201ENST00000384617 107 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGCS1Q01581 AL603825.1-201ENST00000438481 80 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 AC092989.1-201ENST00000481235 277 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 RPS29P25-201ENST00000481709 171 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 RNU6-1088P-201ENST00000516850 104 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 RNU6-1314P-201ENST00000517139 104 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 SUMO2P18-201ENST00000518873 252 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGCS1Q01581 AC026470.2-201ENST00000561492 181 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.26□□□□□ -2.21
HMGCS1Q01581 POLR3GP2-201ENST00000588366 668 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 AC019193.3-201ENST00000609144 554 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 SCARNA4-201ENST00000629045 128 ntBASIC1.26□□□□□ -2.21
HMGCS1Q01581 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
HMGCS1Q01581 Y_RNA.67-201ENST00000362870 100 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 Y_RNA.453-201ENST00000384223 109 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 RNU6-831P-201ENST00000384548 107 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 MIR300-201ENST00000401138 83 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 RNU6-373P-201ENST00000411247 98 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 RPL21P111-201ENST00000418453 477 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGCS1Q01581 AC009237.7-201ENST00000447357 229 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 HSPE1P24-201ENST00000450782 238 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 ATP5J2P3-201ENST00000451550 258 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGCS1Q01581 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 AC067942.3-201ENST00000512025 362 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGCS1Q01581 RNA5SP384-201ENST00000516615 116 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 RNU6-856P-201ENST00000516959 98 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 MIR4753-201ENST00000585119 83 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.25□□□□□ -2.21
HMGCS1Q01581 AC009033.1-201ENST00000624279 431 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 MIR3688-2-201ENST00000636963 87 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 MIR3662-201ENST00000637030 95 ntBASIC1.25□□□□□ -2.21
HMGCS1Q01581 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.25□□□□□ -2.21
HMGCS1Q01581 MIR32-201ENST00000384965 70 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 AL117342.1-201ENST00000404861 406 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.24□□□□□ -2.21
HMGCS1Q01581 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGCS1Q01581 AL445305.1-201ENST00000432577 575 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 AC245047.4-201ENST00000433189 144 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGCS1Q01581 NFU1P2-201ENST00000448700 469 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 snoU13.30-201ENST00000458951 104 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 HMGN2P9-201ENST00000476875 229 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 AC025465.3-201ENST00000510570 311 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 Y_RNA.655-201ENST00000515919 96 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 RNU6-718P-201ENST00000516166 105 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 RNU6-864P-201ENST00000516256 108 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 MTND1P5-201ENST00000517906 940 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 PRR13P7-201ENST00000605538 430 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 AC090517.2-201ENST00000614966 680 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 AC126177.8-201ENST00000618339 1015 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 BX322639.1-202ENST00000423987 2213 ntBASIC1.24□□□□□ -2.21
HMGCS1Q01581 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HMGCS1Q01581 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HMGCS1Q01581 SNORA7.1-201ENST00000363750 139 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 RNU6-1305P-201ENST00000364353 104 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 RNU6-975P-201ENST00000384296 105 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 SNORA67.2-201ENST00000384300 149 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 RPL30P13-201ENST00000418873 348 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGCS1Q01581 snoU13.9-201ENST00000458927 103 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms