Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.37□□□□□ -2.47
PRKDCP78527 MTND1P17-201ENST00000448961 204 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 PCNPP5-201ENST00000452246 481 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-953P-201ENST00000459154 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU7-14P-201ENST00000459331 62 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU2-60P-201ENST00000517290 128 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.37□□□□□ -2.47
PRKDCP78527 AC022616.3-201ENST00000523940 148 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AC012507.3-201ENST00000603556 477 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AL391903.3-201ENST00000612158 163 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-756P-201ENST00000383997 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 SNORD116-23-201ENST00000384645 92 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 MIR10A-201ENST00000385043 110 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 MIR496-201ENST00000385226 102 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNA5SP467-201ENST00000391274 118 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 U8.16-201ENST00000391279 133 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 MTCO2P23-201ENST00000425216 680 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AC003071.1-201ENST00000451219 789 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AC104629.1-201ENST00000494226 508 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 SNORA31.19-201ENST00000517079 126 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.37□□□□□ -2.47
PRKDCP78527 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.37□□□□□ -2.47
PRKDCP78527 AC090617.9-201ENST00000623751 147 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 SNORD115-24-201ENST00000363528 82 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 SNORD111.1-201ENST00000516421 86 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 MTND2P7-201ENST00000521337 640 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 MTCO3P15-201ENST00000526563 574 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 MIR4637-201ENST00000582405 84 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 AC006157.1-201ENST00000611750 366 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
PRKDCP78527 RNA5SP390-201ENST00000410191 113 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 RNA5SP163-201ENST00000410304 99 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 RNU6-284P-201ENST00000411105 106 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 AL139421.1-201ENST00000423010 169 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 USP9YP14-201ENST00000430663 563 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 AC093019.1-201ENST00000443135 252 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.38□□□□□ -2.47
PRKDCP78527 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.38□□□□□ -2.47
PRKDCP78527 AL357080.1-201ENST00000617394 239 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
PRKDCP78527 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 MIR573-201ENST00000384964 99 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.38□□□□□ -2.47
PRKDCP78527 HMGN2P26-201ENST00000463169 339 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 MIR2115-201ENST00000516657 100 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 SNORA74.3-201ENST00000517108 154 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 AP000484.1-201ENST00000620067 1252 ntBASIC-0.38□□□□□ -2.47
PRKDCP78527 RNA5SP117-201ENST00000365294 118 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AL354692.1-201ENST00000423044 315 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AC073910.1-201ENST00000445047 438 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AC074290.1-201ENST00000448883 135 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AL359075.3-201ENST00000613288 217 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 RNA5SP48-201ENST00000363969 126 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 CDK8P2-201ENST00000415020 547 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.39□□□□□ -2.47
PRKDCP78527 AC010153.1-201ENST00000432862 727 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.39□□□□□ -2.47
PRKDCP78527 AL118556.2-201ENST00000614375 824 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.39□□□□□ -2.47
PRKDCP78527 RMST_10.1-201ENST00000616309 154 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AC006504.8-201ENST00000621046 635 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 MIR377-201ENST00000362145 69 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 SNORD32B-201ENST00000364460 84 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 MIR760-201ENST00000390220 80 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 RNU6-57P-201ENST00000411348 103 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 DEFB130D-201ENST00000426866 237 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.39□□□□□ -2.47
PRKDCP78527 AC093809.1-201ENST00000509155 340 ntBASIC-0.39□□□□□ -2.47
PRKDCP78527 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.39□□□□□ -2.47
PRKDCP78527 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 SNORA75.1-201ENST00000391130 148 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 MIR300-201ENST00000401138 83 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 RNU6-856P-201ENST00000516959 98 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.4□□□□□ -2.47
PRKDCP78527 MIR4436A-201ENST00000585278 85 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AL365184.2-201ENST00000431139 435 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AL627311.1-201ENST00000431514 115 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.4□□□□□ -2.47
PRKDCP78527 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.4□□□□□ -2.47
PRKDCP78527 SUMO2P5-201ENST00000506790 245 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AC091163.3-201ENST00000518269 1144 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AC110760.3-201ENST00000598794 467 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AL358072.1-201ENST00000604156 575 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AC022960.3-201ENST00000619794 441 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 MTCO1P31-201ENST00000506355 492 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 RNU6-977P-201ENST00000516411 103 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AC099654.9-201ENST00000637055 678 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 U8.5-201ENST00000364528 136 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.4□□□□□ -2.47
PRKDCP78527 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms