Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
CX3CL1P78423 CHEK2P4-201ENST00000450340 246 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 AC114982.1-201ENST00000469402 321 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 AC144568.1-201ENST00000520139 137 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 AK6P2-201ENST00000549020 471 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 MIR5694-201ENST00000581190 76 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.91□□□□□ -2.1
CX3CL1P78423 uc_338.22-201ENST00000622722 187 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 MIR1291-201ENST00000627649 87 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 AC243829.7-201ENST00000633081 225 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 MIR203B-201ENST00000636080 86 ntBASIC1.91□□□□□ -2.1
CX3CL1P78423 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CX3CL1P78423 RNU1-58P-201ENST00000362413 163 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 RNU6-1301P-201ENST00000362724 104 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 Y_RNA.112-201ENST00000363250 102 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 RNA5SP493-201ENST00000364115 91 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 SNORD114-30-201ENST00000364448 72 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 Y_RNA.813-201ENST00000364639 102 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 RNU6-975P-201ENST00000384296 105 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 Y_RNA.605-201ENST00000410577 105 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AC018865.2-201ENST00000423631 129 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AL137792.2-201ENST00000443484 235 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AL513328.1-201ENST00000446460 224 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AC016717.1-201ENST00000448918 286 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.9□□□□□ -2.11
CX3CL1P78423 AC026436.1-201ENST00000510537 270 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 MIR2355-201ENST00000517199 87 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AC021269.2-201ENST00000532318 330 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.9□□□□□ -2.11
CX3CL1P78423 AC067747.1-201ENST00000608026 250 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AL357075.2-201ENST00000614906 189 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 U2.1-201ENST00000618978 145 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 AC130454.1-201ENST00000622948 401 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CX3CL1P78423 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.9□□□□□ -2.11
CX3CL1P78423 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CX3CL1P78423 AC131280.1-202ENST00000624067 4211 ntBASIC1.9□□□□□ -2.11
CX3CL1P78423 MIRLET7G-201ENST00000362280 84 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 RNU6-23P-201ENST00000363283 107 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 RNU1-115P-201ENST00000365329 160 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.89□□□□□ -2.11
CX3CL1P78423 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CL1P78423 AL357134.1-201ENST00000445848 426 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 RNU1-131P-201ENST00000458943 161 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 RNA5SP24-201ENST00000516478 95 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 RN7SKP49-201ENST00000516675 260 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 AC091144.1-201ENST00000519573 138 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CL1P78423 SNRPGP18-201ENST00000553000 214 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CL1P78423 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CL1P78423 MIR3169-201ENST00000578032 83 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CL1P78423 AC092447.9-201ENST00000603395 144 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CL1P78423 CTSLP2-204ENST00000629029 392 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 MIR4272-201ENST00000635924 64 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CX3CL1P78423 ZNF720P1-201ENST00000562403 1939 ntBASIC1.89□□□□□ -2.11
CX3CL1P78423 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
CX3CL1P78423 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CX3CL1P78423 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CX3CL1P78423 ZNF72P-201ENST00000425869 1908 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.88□□□□□ -2.11
CX3CL1P78423 MIR21-201ENST00000362134 72 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNU6-1145P-201ENST00000384246 107 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNY1P14-201ENST00000384426 108 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNU6-1235P-201ENST00000384559 107 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 MIR628-201ENST00000385229 95 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 MIR548B-201ENST00000385247 97 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNA5SP465-201ENST00000391195 109 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 Y_RNA.595-201ENST00000410403 105 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNA5SP450-201ENST00000411206 102 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 AC074290.1-201ENST00000448883 135 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.88□□□□□ -2.11
CX3CL1P78423 RNU6-498P-201ENST00000459468 107 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RN7SL636P-201ENST00000497504 294 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 AC234781.5-201ENST00000508429 271 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 AC067942.3-201ENST00000512025 362 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNU2-34P-201ENST00000516534 121 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNU4-77P-201ENST00000516692 156 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 RNU6-856P-201ENST00000516959 98 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 AP005660.1-201ENST00000522972 293 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 AP002770.2-201ENST00000543613 532 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 AC006600.1-201ENST00000572529 153 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.88□□□□□ -2.11
CX3CL1P78423 AC103810.6-201ENST00000606708 136 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 AC016717.2-201ENST00000609089 5141 ntBASIC1.88□□□□□ -2.11
CX3CL1P78423 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.87□□□□□ -2.11
CX3CL1P78423 Y_RNA.138-201ENST00000363462 102 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 U3.8-201ENST00000363675 217 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 Y_RNA.445-201ENST00000384168 102 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms