Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MIR514A2-201ENST00000385131 88 ntBASIC1.28□□□□□ -2.2
IRX3P78415 MIR514A3-201ENST00000385132 88 ntBASIC1.28□□□□□ -2.2
IRX3P78415 MIR1283-1-201ENST00000408494 87 ntBASIC1.28□□□□□ -2.2
IRX3P78415 RNA5SP494-201ENST00000410653 129 ntBASIC1.28□□□□□ -2.2
IRX3P78415 MTCO3P29-201ENST00000432119 779 ntBASIC1.28□□□□□ -2.2
IRX3P78415 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.28□□□□□ -2.2
IRX3P78415 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.28□□□□□ -2.2
IRX3P78415 AC091435.1-201ENST00000505442 584 ntBASIC1.28□□□□□ -2.2
IRX3P78415 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.28□□□□□ -2.2
IRX3P78415 Y_RNA.670-201ENST00000516255 105 ntBASIC1.28□□□□□ -2.2
IRX3P78415 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
IRX3P78415 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.28□□□□□ -2.2
IRX3P78415 MIR5094-201ENST00000578766 85 ntBASIC1.28□□□□□ -2.2
IRX3P78415 CPDP1-201ENST00000579660 283 ntBASIC1.28□□□□□ -2.2
IRX3P78415 MIR3611-201ENST00000584484 83 ntBASIC1.28□□□□□ -2.2
IRX3P78415 AC010620.1-201ENST00000601088 1102 ntBASIC1.28□□□□□ -2.2
IRX3P78415 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.28□□□□□ -2.2
IRX3P78415 AC022513.1-201ENST00000624512 117 ntBASIC1.28□□□□□ -2.2
IRX3P78415 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.28□□□□□ -2.2
IRX3P78415 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
IRX3P78415 RNU6-1187P-201ENST00000364771 110 ntBASIC1.27□□□□□ -2.21
IRX3P78415 Y_RNA.359-201ENST00000365498 102 ntBASIC1.27□□□□□ -2.21
IRX3P78415 RNU6-1235P-201ENST00000384559 107 ntBASIC1.27□□□□□ -2.21
IRX3P78415 RNU6-296P-201ENST00000384608 107 ntBASIC1.27□□□□□ -2.21
IRX3P78415 SNORD73A-201ENST00000386062 65 ntBASIC1.27□□□□□ -2.21
IRX3P78415 MTCO3P40-201ENST00000392516 676 ntBASIC1.27□□□□□ -2.21
IRX3P78415 MIR1267-201ENST00000408723 78 ntBASIC1.27□□□□□ -2.21
IRX3P78415 MIR548J-201ENST00000408833 112 ntBASIC1.27□□□□□ -2.21
IRX3P78415 RNU6-648P-201ENST00000410190 107 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.27□□□□□ -2.21
IRX3P78415 MTCO1P20-201ENST00000425366 358 ntBASIC1.27□□□□□ -2.21
IRX3P78415 MTND1P26-201ENST00000440488 538 ntBASIC1.27□□□□□ -2.21
IRX3P78415 JTBP1-201ENST00000441314 247 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AC009237.7-201ENST00000447357 229 ntBASIC1.27□□□□□ -2.21
IRX3P78415 OR2AQ1P-201ENST00000451972 200 ntBASIC1.27□□□□□ -2.21
IRX3P78415 RNU6-498P-201ENST00000459468 107 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AC010531.2-201ENST00000465012 153 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AC107401.1-201ENST00000503426 685 ntBASIC1.27□□□□□ -2.21
IRX3P78415 Y_RNA.693-201ENST00000516641 110 ntBASIC1.27□□□□□ -2.21
IRX3P78415 RNA5SP54-201ENST00000516951 92 ntBASIC1.27□□□□□ -2.21
IRX3P78415 RNU6-835P-201ENST00000516974 104 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.27□□□□□ -2.21
IRX3P78415 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.27□□□□□ -2.21
IRX3P78415 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.27□□□□□ -2.21
IRX3P78415 AC025423.5-201ENST00000550230 219 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AC092807.2-201ENST00000609367 243 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AC064836.2-201ENST00000609491 462 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AL158209.2-201ENST00000619266 216 ntBASIC1.27□□□□□ -2.21
IRX3P78415 AL359880.1-201ENST00000621879 266 ntBASIC1.27□□□□□ -2.21
IRX3P78415 MIR6863-201ENST00000636112 90 ntBASIC1.27□□□□□ -2.21
IRX3P78415 Y_RNA.354-201ENST00000365448 111 ntBASIC1.26□□□□□ -2.21
IRX3P78415 RNU6-968P-201ENST00000384076 107 ntBASIC1.26□□□□□ -2.21
IRX3P78415 SNORA36A-201ENST00000384221 132 ntBASIC1.26□□□□□ -2.21
IRX3P78415 Y_RNA.540-201ENST00000384638 111 ntBASIC1.26□□□□□ -2.21
IRX3P78415 MIR7-2-201ENST00000384970 110 ntBASIC1.26□□□□□ -2.21
IRX3P78415 SNORA12.2-201ENST00000391040 156 ntBASIC1.26□□□□□ -2.21
IRX3P78415 CALM2P3-201ENST00000400429 449 ntBASIC1.26□□□□□ -2.21
IRX3P78415 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.26□□□□□ -2.21
IRX3P78415 RPL21P111-201ENST00000418453 477 ntBASIC1.26□□□□□ -2.21
IRX3P78415 MTND3P21-201ENST00000433774 331 ntBASIC1.26□□□□□ -2.21
IRX3P78415 SEPT14P3-201ENST00000439401 183 ntBASIC1.26□□□□□ -2.21
IRX3P78415 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.26□□□□□ -2.21
IRX3P78415 DYNLT3P2-201ENST00000442517 295 ntBASIC1.26□□□□□ -2.21
IRX3P78415 AL732372.2-207ENST00000445840 183 ntBASIC1.26□□□□□ -2.21
IRX3P78415 MTND3P16-201ENST00000452205 344 ntBASIC1.26□□□□□ -2.21
IRX3P78415 SEPT14P2-201ENST00000453405 183 ntBASIC1.26□□□□□ -2.21
IRX3P78415 RPL26P26-201ENST00000480251 434 ntBASIC1.26□□□□□ -2.21
IRX3P78415 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.26□□□□□ -2.21
IRX3P78415 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.26□□□□□ -2.21
IRX3P78415 SEPT14P4-201ENST00000513445 186 ntBASIC1.26□□□□□ -2.21
IRX3P78415 FO082796.1-201ENST00000523795 183 ntBASIC1.26□□□□□ -2.21
IRX3P78415 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
IRX3P78415 HMGB1P33-201ENST00000563485 527 ntBASIC1.26□□□□□ -2.21
IRX3P78415 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.26□□□□□ -2.21
IRX3P78415 CTHRC1P1-201ENST00000605383 469 ntBASIC1.26□□□□□ -2.21
IRX3P78415 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.26□□□□□ -2.21
IRX3P78415 AC097520.1-201ENST00000624435 385 ntBASIC1.26□□□□□ -2.21
IRX3P78415 FER-210ENST00000628534 558 ntTSL 5 BASIC1.26□□□□□ -2.21
IRX3P78415 AC068137.3-201ENST00000639191 341 ntBASIC1.26□□□□□ -2.21
IRX3P78415 RNU6-137P-201ENST00000363680 108 ntBASIC1.25□□□□□ -2.21
IRX3P78415 RNU5F-3P-201ENST00000363767 117 ntBASIC1.25□□□□□ -2.21
IRX3P78415 Y_RNA.231-201ENST00000364358 102 ntBASIC1.25□□□□□ -2.21
IRX3P78415 SNORA63D-201ENST00000364359 132 ntBASIC1.25□□□□□ -2.21
IRX3P78415 RNU6-1317P-201ENST00000364582 104 ntBASIC1.25□□□□□ -2.21
IRX3P78415 Y_RNA.378-201ENST00000365652 113 ntBASIC1.25□□□□□ -2.21
IRX3P78415 RNU2-7P-201ENST00000410794 178 ntBASIC1.25□□□□□ -2.21
IRX3P78415 ERLEC1P1-201ENST00000433806 578 ntBASIC1.25□□□□□ -2.21
IRX3P78415 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.25□□□□□ -2.21
IRX3P78415 RNA5SP480-201ENST00000516840 109 ntBASIC1.25□□□□□ -2.21
IRX3P78415 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.25□□□□□ -2.21
IRX3P78415 AC026371.1-201ENST00000551867 419 ntBASIC1.25□□□□□ -2.21
IRX3P78415 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.25□□□□□ -2.21
IRX3P78415 AL162413.1-201ENST00000603198 110 ntBASIC1.25□□□□□ -2.21
IRX3P78415 AP000907.4-201ENST00000604143 237 ntBASIC1.25□□□□□ -2.21
IRX3P78415 BX322639.1-202ENST00000423987 2213 ntBASIC1.25□□□□□ -2.21
IRX3P78415 RNU6-245P-201ENST00000384020 107 ntBASIC1.24□□□□□ -2.21
IRX3P78415 RNU6-975P-201ENST00000384296 105 ntBASIC1.24□□□□□ -2.21
IRX3P78415 SNORD116-1-201ENST00000384335 95 ntBASIC1.24□□□□□ -2.21
IRX3P78415 MIR586-201ENST00000385035 97 ntBASIC1.24□□□□□ -2.21
IRX3P78415 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms