Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC010928.2-201ENST00000588017 287 ntBASIC1.98□□□□□ -2.09
IRX4P78413 AC005014.2-201ENST00000607795 599 ntBASIC1.98□□□□□ -2.09
IRX4P78413 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.98□□□□□ -2.09
IRX4P78413 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
IRX4P78413 RNU4-9P-201ENST00000364951 139 ntBASIC1.97□□□□□ -2.09
IRX4P78413 RNU6-890P-201ENST00000384121 107 ntBASIC1.97□□□□□ -2.09
IRX4P78413 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
IRX4P78413 RNU6-1093P-201ENST00000391194 107 ntBASIC1.97□□□□□ -2.09
IRX4P78413 MTCYBP4-201ENST00000401524 249 ntBASIC1.97□□□□□ -2.09
IRX4P78413 RNU2-20P-201ENST00000410425 191 ntBASIC1.97□□□□□ -2.09
IRX4P78413 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
IRX4P78413 SNORD19B-201ENST00000459623 84 ntBASIC1.97□□□□□ -2.09
IRX4P78413 MIR449C-201ENST00000516047 92 ntBASIC1.97□□□□□ -2.09
IRX4P78413 RNU6-307P-201ENST00000516743 106 ntBASIC1.97□□□□□ -2.09
IRX4P78413 Y_RNA.718-201ENST00000517110 102 ntBASIC1.97□□□□□ -2.09
IRX4P78413 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.97□□□□□ -2.09
IRX4P78413 AC018630.3-201ENST00000542637 96 ntBASIC1.97□□□□□ -2.09
IRX4P78413 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.97□□□□□ -2.09
IRX4P78413 PCGEM1.1-201ENST00000613431 131 ntBASIC1.97□□□□□ -2.09
IRX4P78413 MIR203B-201ENST00000636080 86 ntBASIC1.97□□□□□ -2.09
IRX4P78413 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
IRX4P78413 RNU4-79P-201ENST00000362764 141 ntBASIC1.96□□□□□ -2.1
IRX4P78413 U3.9-201ENST00000363823 204 ntBASIC1.96□□□□□ -2.1
IRX4P78413 RNU6-595P-201ENST00000363944 107 ntBASIC1.96□□□□□ -2.1
IRX4P78413 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
IRX4P78413 SNORD32B-201ENST00000364460 84 ntBASIC1.96□□□□□ -2.1
IRX4P78413 MIR32-201ENST00000384965 70 ntBASIC1.96□□□□□ -2.1
IRX4P78413 MIR487A-201ENST00000385009 80 ntBASIC1.96□□□□□ -2.1
IRX4P78413 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
IRX4P78413 OR2AQ1P-201ENST00000451972 200 ntBASIC1.96□□□□□ -2.1
IRX4P78413 TOMM22P6-201ENST00000465035 409 ntBASIC1.96□□□□□ -2.1
IRX4P78413 RPL30P10-201ENST00000488148 337 ntBASIC1.96□□□□□ -2.1
IRX4P78413 AC097473.1-201ENST00000508142 408 ntBASIC1.96□□□□□ -2.1
IRX4P78413 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.96□□□□□ -2.1
IRX4P78413 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.96□□□□□ -2.1
IRX4P78413 AL590705.4-201ENST00000532209 134 ntBASIC1.96□□□□□ -2.1
IRX4P78413 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.96□□□□□ -2.1
IRX4P78413 AC005899.2-201ENST00000584353 90 ntBASIC1.96□□□□□ -2.1
IRX4P78413 7SK.7-201ENST00000603504 247 ntBASIC1.96□□□□□ -2.1
IRX4P78413 AC133104.2-201ENST00000615272 193 ntBASIC1.96□□□□□ -2.1
IRX4P78413 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.96□□□□□ -2.1
IRX4P78413 AC084781.2-201ENST00000615568 161 ntBASIC1.96□□□□□ -2.1
IRX4P78413 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.96□□□□□ -2.1
IRX4P78413 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
IRX4P78413 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.96□□□□□ -2.1
IRX4P78413 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.95□□□□□ -2.1
IRX4P78413 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
IRX4P78413 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
IRX4P78413 RNY1P16-201ENST00000363063 111 ntBASIC1.95□□□□□ -2.1
IRX4P78413 U8.10-201ENST00000384260 133 ntBASIC1.95□□□□□ -2.1
IRX4P78413 Y_RNA.509-201ENST00000384506 99 ntBASIC1.95□□□□□ -2.1
IRX4P78413 MIR549A-201ENST00000385268 96 ntBASIC1.95□□□□□ -2.1
IRX4P78413 SNORA75.6-201ENST00000391318 127 ntBASIC1.95□□□□□ -2.1
IRX4P78413 RPS26P42-201ENST00000413485 326 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
IRX4P78413 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
IRX4P78413 BTF3P4-201ENST00000418852 495 ntBASIC1.95□□□□□ -2.1
IRX4P78413 MTCO2P27-201ENST00000420740 428 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.95□□□□□ -2.1
IRX4P78413 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
IRX4P78413 CBX3P6-201ENST00000430257 527 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.95□□□□□ -2.1
IRX4P78413 AC236972.2-201ENST00000434979 310 ntBASIC1.95□□□□□ -2.1
IRX4P78413 IPO7P1-201ENST00000442031 636 ntBASIC1.95□□□□□ -2.1
IRX4P78413 snoU13.30-201ENST00000458951 104 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.95□□□□□ -2.1
IRX4P78413 RNU6-120P-201ENST00000516077 103 ntBASIC1.95□□□□□ -2.1
IRX4P78413 EIF4A1P12-201ENST00000551910 141 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AC090517.1-201ENST00000569307 266 ntBASIC1.95□□□□□ -2.1
IRX4P78413 MIR3122-201ENST00000577243 73 ntBASIC1.95□□□□□ -2.1
IRX4P78413 C8orf59P2-201ENST00000603441 271 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AC005520.5-201ENST00000613926 164 ntBASIC1.95□□□□□ -2.1
IRX4P78413 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.95□□□□□ -2.1
IRX4P78413 AC009487.4-201ENST00000624969 3585 ntBASIC1.94□□□□□ -2.1
IRX4P78413 RNA5SP190-201ENST00000365222 118 ntBASIC1.94□□□□□ -2.1
IRX4P78413 SNORA40.19-201ENST00000390846 128 ntBASIC1.94□□□□□ -2.1
IRX4P78413 RNU6-321P-201ENST00000410912 106 ntBASIC1.94□□□□□ -2.1
IRX4P78413 MTND3P23-201ENST00000431980 347 ntBASIC1.94□□□□□ -2.1
IRX4P78413 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
IRX4P78413 AC022493.2-201ENST00000506122 481 ntBASIC1.94□□□□□ -2.1
IRX4P78413 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.94□□□□□ -2.1
IRX4P78413 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.94□□□□□ -2.1
IRX4P78413 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.94□□□□□ -2.1
IRX4P78413 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.94□□□□□ -2.1
IRX4P78413 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
IRX4P78413 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.94□□□□□ -2.1
IRX4P78413 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.94□□□□□ -2.1
IRX4P78413 AC016727.2-201ENST00000603988 621 ntBASIC1.94□□□□□ -2.1
IRX4P78413 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.94□□□□□ -2.1
IRX4P78413 AC126177.8-201ENST00000618339 1015 ntBASIC1.94□□□□□ -2.1
IRX4P78413 AC137590.2-201ENST00000619709 240 ntBASIC1.94□□□□□ -2.1
IRX4P78413 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.94□□□□□ -2.1
IRX4P78413 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
IRX4P78413 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
IRX4P78413 MIR337-201ENST00000362281 93 ntBASIC1.93□□□□□ -2.1
IRX4P78413 Y_RNA.61-201ENST00000362835 102 ntBASIC1.93□□□□□ -2.1
IRX4P78413 RNU6-797P-201ENST00000363101 109 ntBASIC1.93□□□□□ -2.1
IRX4P78413 SNORD115-32-201ENST00000364079 82 ntBASIC1.93□□□□□ -2.1
IRX4P78413 Y_RNA.269-201ENST00000364685 89 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms