Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU6-897P-201ENST00000517135 105 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
ABCA4P78363 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.02□□□□□ -2.41
ABCA4P78363 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.02□□□□□ -2.41
ABCA4P78363 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.02□□□□□ -2.41
ABCA4P78363 AC072039.2-201ENST00000608883 439 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC017083.3-201ENST00000609955 700 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU6-514P-201ENST00000384208 107 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 MIR653-201ENST00000385279 96 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC090844.1-201ENST00000422019 156 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.02□□□□□ -2.41
ABCA4P78363 CALM2P2-201ENST00000428512 440 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.02□□□□□ -2.41
ABCA4P78363 USP9YP28-201ENST00000435142 589 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU7-159P-201ENST00000459284 62 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU7-14P-201ENST00000459331 62 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU2-34P-201ENST00000516534 121 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 SNORA18.7-201ENST00000516910 131 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC010525.2-201ENST00000590920 195 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 DEFB131E-202ENST00000602581 683 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC022217.4-201ENST00000604389 163 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC245297.2-201ENST00000610119 565 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AL139418.1-201ENST00000613613 177 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 RMST_7.1-201ENST00000621935 268 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC106754.2-201ENST00000623006 233 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AL078595.3-201ENST00000623815 1166 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 MIR198-201ENST00000637333 62 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 RNU6-161P-201ENST00000363051 106 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 RNA5SP128-201ENST00000365305 116 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 RNU6-331P-201ENST00000384724 107 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 RNA5SP222-201ENST00000411039 105 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 C1DP2-201ENST00000418167 426 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
ABCA4P78363 AC010154.1-201ENST00000425857 269 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 MTND1P32-201ENST00000433043 938 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA4P78363 C1DP4-201ENST00000455429 424 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AL049829.1-201ENST00000465411 156 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 MTND3P5-201ENST00000512798 333 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA4P78363 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA4P78363 RNU2-10P-201ENST00000516375 211 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 RPL23AP91-201ENST00000569211 455 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AL031667.3-201ENST00000620124 655 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AP002782.1-201ENST00000623107 614 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.03□□□□□ -2.41
ABCA4P78363 AC112487.2-201ENST00000637950 304 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.03□□□□□ -2.41
ABCA4P78363 SNORD32A-201ENST00000364805 84 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 MIR643-201ENST00000385267 97 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 RNU2-39P-201ENST00000410604 198 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AL031779.1-201ENST00000415663 330 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 MTCO2P34-201ENST00000421994 607 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AC078809.1-201ENST00000427601 140 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA4P78363 AC104332.1-201ENST00000440471 797 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 MTND5P2-201ENST00000442927 1142 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 HMGN2P26-201ENST00000463169 339 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA4P78363 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.03□□□□□ -2.41
ABCA4P78363 AC004223.2-201ENST00000590309 544 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AC068790.2-201ENST00000602601 557 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
ABCA4P78363 AC144521.1-201ENST00000607148 956 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AC104458.1-201ENST00000608243 463 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 AC024940.5-201ENST00000622889 474 ntBASIC-0.03□□□□□ -2.41
ABCA4P78363 RNU6-552P-201ENST00000362869 119 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU1-76P-201ENST00000362903 159 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU6-190P-201ENST00000384154 102 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU6-125P-201ENST00000384505 107 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 MIR601-201ENST00000385256 79 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 SNORA26-201ENST00000391286 122 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 MIR300-201ENST00000401138 83 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 MTND4P3-201ENST00000417829 541 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA4P78363 MTCO2P12-201ENST00000427426 682 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 HMGN2P22-201ENST00000427588 175 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC093019.1-201ENST00000443135 252 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AL360271.2-201ENST00000447710 161 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU7-94P-201ENST00000459576 63 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC027288.2-201ENST00000553028 243 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 TPRKBP2-201ENST00000565969 475 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC090617.3-201ENST00000573670 475 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA4P78363 MIR4436A-201ENST00000585278 85 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AL117336.2-201ENST00000602435 335 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC078795.3-201ENST00000602913 472 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC080078.2-201ENST00000603766 501 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC112187.2-201ENST00000604345 283 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 Z99289.3-201ENST00000605586 594 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU6-94P-201ENST00000607728 107 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA4P78363 USP9YP11-201ENST00000427537 717 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms