Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MTCO2P7-201ENST00000446518 666 ntBASIC0.38□□□□□ -2.35
SKP1P63208 AC233266.1-201ENST00000454518 96 ntBASIC0.38□□□□□ -2.35
SKP1P63208 AC245047.8-201ENST00000456455 284 ntBASIC0.38□□□□□ -2.35
SKP1P63208 snoU13.6-201ENST00000458785 104 ntBASIC0.38□□□□□ -2.35
SKP1P63208 RNU7-182P-201ENST00000459009 62 ntBASIC0.38□□□□□ -2.35
SKP1P63208 RNU6-1132P-201ENST00000459214 107 ntBASIC0.38□□□□□ -2.35
SKP1P63208 RNU7-94P-201ENST00000459576 63 ntBASIC0.38□□□□□ -2.35
SKP1P63208 SNORD27.1-201ENST00000516319 72 ntBASIC0.38□□□□□ -2.35
SKP1P63208 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.38□□□□□ -2.35
SKP1P63208 MTCO3P23-201ENST00000561363 289 ntBASIC0.38□□□□□ -2.35
SKP1P63208 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.38□□□□□ -2.35
SKP1P63208 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
SKP1P63208 MIR4775-201ENST00000581168 75 ntBASIC0.38□□□□□ -2.35
SKP1P63208 AC242852.1-201ENST00000612151 96 ntBASIC0.38□□□□□ -2.35
SKP1P63208 AC244015.1-201ENST00000622301 99 ntBASIC0.38□□□□□ -2.35
SKP1P63208 AC008873.1-201ENST00000625051 138 ntBASIC0.38□□□□□ -2.35
SKP1P63208 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
SKP1P63208 RNU6-266P-201ENST00000364225 107 ntBASIC0.37□□□□□ -2.35
SKP1P63208 RNU6-1305P-201ENST00000364353 104 ntBASIC0.37□□□□□ -2.35
SKP1P63208 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
SKP1P63208 AC092423.1-201ENST00000430165 186 ntBASIC0.37□□□□□ -2.35
SKP1P63208 USP9YP12-201ENST00000450481 570 ntBASIC0.37□□□□□ -2.35
SKP1P63208 RNU6-221P-201ENST00000459541 99 ntBASIC0.37□□□□□ -2.35
SKP1P63208 AC010493.1-201ENST00000513479 292 ntBASIC0.37□□□□□ -2.35
SKP1P63208 RNU6-917P-201ENST00000516294 104 ntBASIC0.37□□□□□ -2.35
SKP1P63208 Vault.3-201ENST00000516676 95 ntBASIC0.37□□□□□ -2.35
SKP1P63208 MIR4778-201ENST00000577635 80 ntBASIC0.37□□□□□ -2.35
SKP1P63208 AC002044.1-201ENST00000606707 158 ntBASIC0.37□□□□□ -2.35
SKP1P63208 SNORA28-201ENST00000606769 126 ntBASIC0.37□□□□□ -2.35
SKP1P63208 AL589743.1-201ENST00000551932 2712 ntBASIC0.37□□□□□ -2.35
SKP1P63208 RNU5E-5P-201ENST00000365379 116 ntBASIC0.36□□□□□ -2.35
SKP1P63208 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
SKP1P63208 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.36□□□□□ -2.35
SKP1P63208 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.36□□□□□ -2.35
SKP1P63208 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.36□□□□□ -2.35
SKP1P63208 AC104850.1-201ENST00000435940 476 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AL512286.1-201ENST00000439244 400 ntBASIC0.36□□□□□ -2.35
SKP1P63208 U7.7-201ENST00000459276 60 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AC091951.3-201ENST00000504093 246 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AC106038.2-201ENST00000520706 568 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AP002001.1-203ENST00000534002 267 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.36□□□□□ -2.35
SKP1P63208 AC068790.2-201ENST00000602601 557 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
SKP1P63208 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
SKP1P63208 SEPT14P19-203ENST00000633205 211 ntBASIC0.36□□□□□ -2.35
SKP1P63208 MTND4P9-201ENST00000507819 1346 ntBASIC0.36□□□□□ -2.35
SKP1P63208 RNY1-201ENST00000364228 113 ntBASIC0.35□□□□□ -2.35
SKP1P63208 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SKP1P63208 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.35□□□□□ -2.35
SKP1P63208 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.35□□□□□ -2.35
SKP1P63208 AC005002.2-201ENST00000438228 269 ntBASIC0.35□□□□□ -2.35
SKP1P63208 GMFBP1-201ENST00000467831 427 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.35□□□□□ -2.35
SKP1P63208 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
SKP1P63208 RNU7-128P-201ENST00000517247 62 ntBASIC0.35□□□□□ -2.35
SKP1P63208 SUB1P2-201ENST00000556401 297 ntBASIC0.35□□□□□ -2.35
SKP1P63208 MTND4P33-201ENST00000556706 766 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AC025449.1-201ENST00000603896 529 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AP000907.4-201ENST00000604143 237 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AC004832.4-201ENST00000608952 331 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AL133173.2-201ENST00000614270 90 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AC027807.2-201ENST00000616099 408 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AC007742.2-201ENST00000618226 398 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AC068792.1-201ENST00000621354 417 ntBASIC0.35□□□□□ -2.35
SKP1P63208 AL078596.1-201ENST00000624856 447 ntBASIC0.35□□□□□ -2.35
SKP1P63208 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
SKP1P63208 AP000568.1-201ENST00000282964 442 ntBASIC0.34□□□□□ -2.36
SKP1P63208 RNU6-1237P-201ENST00000384777 107 ntBASIC0.34□□□□□ -2.36
SKP1P63208 SNORD70.1-201ENST00000391007 85 ntBASIC0.34□□□□□ -2.36
SKP1P63208 SNORD99-201ENST00000408612 74 ntBASIC0.34□□□□□ -2.36
SKP1P63208 AC004866.1-201ENST00000411748 78 ntBASIC0.34□□□□□ -2.36
SKP1P63208 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.34□□□□□ -2.36
SKP1P63208 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.34□□□□□ -2.36
SKP1P63208 MTCO2P3-201ENST00000442543 421 ntBASIC0.34□□□□□ -2.36
SKP1P63208 MTCO3P8-201ENST00000453691 755 ntBASIC0.34□□□□□ -2.36
SKP1P63208 AC007215.1-201ENST00000464893 276 ntBASIC0.34□□□□□ -2.36
SKP1P63208 AC022493.2-201ENST00000506122 481 ntBASIC0.34□□□□□ -2.36
SKP1P63208 AC025465.4-201ENST00000513422 638 ntBASIC0.34□□□□□ -2.36
SKP1P63208 SNRPGP20-201ENST00000604477 205 ntBASIC0.34□□□□□ -2.36
SKP1P63208 AL391903.3-201ENST00000612158 163 ntBASIC0.34□□□□□ -2.36
SKP1P63208 RNU5B-2P-201ENST00000363036 113 ntBASIC0.33□□□□□ -2.36
SKP1P63208 RNU6-1029P-201ENST00000384109 107 ntBASIC0.33□□□□□ -2.36
SKP1P63208 RNU6-74P-201ENST00000384235 107 ntBASIC0.33□□□□□ -2.36
SKP1P63208 RNU6-1127P-201ENST00000384580 107 ntBASIC0.33□□□□□ -2.36
SKP1P63208 RNU6-1106P-201ENST00000390845 107 ntBASIC0.33□□□□□ -2.36
SKP1P63208 GPR143P-201ENST00000434155 205 ntBASIC0.33□□□□□ -2.36
SKP1P63208 LINC01399-202ENST00000458450 244 ntBASIC0.33□□□□□ -2.36
SKP1P63208 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.33□□□□□ -2.36
SKP1P63208 RNU7-99P-201ENST00000516271 62 ntBASIC0.33□□□□□ -2.36
SKP1P63208 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.33□□□□□ -2.36
SKP1P63208 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.33□□□□□ -2.36
SKP1P63208 RNU6-500P-201ENST00000362349 107 ntBASIC0.32□□□□□ -2.36
SKP1P63208 Y_RNA.118-201ENST00000363300 101 ntBASIC0.32□□□□□ -2.36
SKP1P63208 SNORA67.2-201ENST00000384300 149 ntBASIC0.32□□□□□ -2.36
SKP1P63208 SNORD89-201ENST00000390981 114 ntBASIC0.32□□□□□ -2.36
SKP1P63208 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.32□□□□□ -2.36
SKP1P63208 MTATP6P14-201ENST00000455189 673 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms