Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
USP46P62068 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP46P62068 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP46P62068 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
USP46P62068 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP46P62068 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.25□□□□□ -1.73
USP46P62068 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
USP46P62068 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.25□□□□□ -1.73
USP46P62068 AC068647.1-201ENST00000489539 2265 ntBASIC4.25□□□□□ -1.73
USP46P62068 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP46P62068 RNU6-1107P-201ENST00000364817 104 ntBASIC4.25□□□□□ -1.73
USP46P62068 RNU6-1138P-201ENST00000365359 106 ntBASIC4.25□□□□□ -1.73
USP46P62068 MIR1302-4-201ENST00000408701 150 ntBASIC4.25□□□□□ -1.73
USP46P62068 Y_RNA.621-201ENST00000411065 96 ntBASIC4.25□□□□□ -1.73
USP46P62068 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.25□□□□□ -1.73
USP46P62068 RN7SL807P-201ENST00000470923 297 ntBASIC4.25□□□□□ -1.73
USP46P62068 AC097462.1-201ENST00000514125 324 ntBASIC4.25□□□□□ -1.73
USP46P62068 AC096725.1-201ENST00000514266 313 ntBASIC4.25□□□□□ -1.73
USP46P62068 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
USP46P62068 AC034105.4-201ENST00000568304 277 ntBASIC4.25□□□□□ -1.73
USP46P62068 AC025627.2-201ENST00000576220 160 ntBASIC4.25□□□□□ -1.73
USP46P62068 AL365205.2-201ENST00000594586 68 ntBASIC4.25□□□□□ -1.73
USP46P62068 AL606490.9-201ENST00000603331 271 ntBASIC4.25□□□□□ -1.73
USP46P62068 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP46P62068 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.25□□□□□ -1.73
USP46P62068 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP46P62068 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
USP46P62068 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP46P62068 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.24□□□□□ -1.73
USP46P62068 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP46P62068 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.24□□□□□ -1.73
USP46P62068 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
USP46P62068 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP46P62068 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.24□□□□□ -1.73
USP46P62068 RNU1-105P-201ENST00000363470 161 ntBASIC4.24□□□□□ -1.73
USP46P62068 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
USP46P62068 SNORD35B-201ENST00000363660 87 ntBASIC4.24□□□□□ -1.73
USP46P62068 AC063976.3-201ENST00000426849 329 ntBASIC4.24□□□□□ -1.73
USP46P62068 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.24□□□□□ -1.73
USP46P62068 RPL29P14-201ENST00000495837 428 ntBASIC4.24□□□□□ -1.73
USP46P62068 RNU6-844P-201ENST00000517175 102 ntBASIC4.24□□□□□ -1.73
USP46P62068 AC018630.3-201ENST00000542637 96 ntBASIC4.24□□□□□ -1.73
USP46P62068 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.24□□□□□ -1.73
USP46P62068 PRELID2P1-201ENST00000552837 301 ntBASIC4.24□□□□□ -1.73
USP46P62068 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
USP46P62068 MIR1254-2-201ENST00000579553 63 ntBASIC4.24□□□□□ -1.73
USP46P62068 AC006130.2-201ENST00000586202 326 ntBASIC4.24□□□□□ -1.73
USP46P62068 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP46P62068 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.24□□□□□ -1.73
USP46P62068 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.24□□□□□ -1.73
USP46P62068 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP46P62068 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP46P62068 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP46P62068 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.23□□□□□ -1.73
USP46P62068 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP46P62068 SNORA60-201ENST00000362396 134 ntBASIC4.23□□□□□ -1.73
USP46P62068 AL138878.1-201ENST00000405131 347 ntBASIC4.23□□□□□ -1.73
USP46P62068 AC002075.2-201ENST00000425207 252 ntBASIC4.23□□□□□ -1.73
USP46P62068 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.23□□□□□ -1.73
USP46P62068 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.23□□□□□ -1.73
USP46P62068 RNU6-965P-201ENST00000516721 96 ntBASIC4.23□□□□□ -1.73
USP46P62068 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.23□□□□□ -1.73
USP46P62068 AC007012.1-201ENST00000567192 175 ntBASIC4.23□□□□□ -1.73
USP46P62068 MIR7702-201ENST00000621931 59 ntBASIC4.23□□□□□ -1.73
USP46P62068 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP46P62068 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP46P62068 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP46P62068 Y_RNA.66-201ENST00000362862 102 ntBASIC4.22□□□□□ -1.73
USP46P62068 Y_RNA.281-201ENST00000364774 94 ntBASIC4.22□□□□□ -1.73
USP46P62068 SNORA1-201ENST00000384107 130 ntBASIC4.22□□□□□ -1.73
USP46P62068 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
USP46P62068 RN7SL585P-201ENST00000470538 280 ntBASIC4.22□□□□□ -1.73
USP46P62068 RNU6-504P-201ENST00000516568 104 ntBASIC4.22□□□□□ -1.73
USP46P62068 AC110741.2-201ENST00000605278 268 ntBASIC4.22□□□□□ -1.73
USP46P62068 U6.73-201ENST00000619194 103 ntBASIC4.22□□□□□ -1.73
USP46P62068 CR392039.5-201ENST00000623201 510 ntBASIC4.22□□□□□ -1.73
USP46P62068 AC009487.4-201ENST00000624969 3585 ntBASIC4.22□□□□□ -1.73
USP46P62068 AC002546.1-201ENST00000588041 2504 ntBASIC4.22□□□□□ -1.73
USP46P62068 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
USP46P62068 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.21□□□□□ -1.73
USP46P62068 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
USP46P62068 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
USP46P62068 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
USP46P62068 SNORD12C-201ENST00000386307 89 ntBASIC4.21□□□□□ -1.74
USP46P62068 Z98941.1-201ENST00000407764 100 ntBASIC4.21□□□□□ -1.74
USP46P62068 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.21□□□□□ -1.74
USP46P62068 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.21□□□□□ -1.74
USP46P62068 RNU6-586P-201ENST00000517265 104 ntBASIC4.21□□□□□ -1.74
USP46P62068 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.21□□□□□ -1.74
USP46P62068 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.21□□□□□ -1.74
USP46P62068 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP46P62068 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
USP46P62068 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP46P62068 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP46P62068 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP46P62068 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
USP46P62068 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP46P62068 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USP46P62068 RNU6-486P-201ENST00000363116 107 ntBASIC4.2□□□□□ -1.74
USP46P62068 RNA5SP399-201ENST00000364003 117 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms