Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 RNU6-1132P-201ENST00000459214 107 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
AP1S1P61966 RNU6-1146P-201ENST00000516282 102 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 AC025647.1-201ENST00000517879 253 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.47□□□□□ -2.33
AP1S1P61966 AP003072.2-201ENST00000527756 676 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.47□□□□□ -2.33
AP1S1P61966 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.47□□□□□ -2.33
AP1S1P61966 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.47□□□□□ -2.33
AP1S1P61966 AP000907.4-201ENST00000604143 237 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 MIR98-201ENST00000606724 119 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 RMST_3.1-201ENST00000611651 109 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 RNU6-1335P-201ENST00000365426 107 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 RNU6-108P-201ENST00000365558 107 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
AP1S1P61966 RN7SKP200-201ENST00000410564 320 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.46□□□□□ -2.34
AP1S1P61966 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.46□□□□□ -2.34
AP1S1P61966 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 AC009237.7-201ENST00000447357 229 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.46□□□□□ -2.34
AP1S1P61966 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.46□□□□□ -2.34
AP1S1P61966 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.46□□□□□ -2.34
AP1S1P61966 RNA5SP255-201ENST00000516370 107 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 RNU1-142P-201ENST00000516682 145 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 AL391840.1-201ENST00000571144 367 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.46□□□□□ -2.34
AP1S1P61966 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 AC139792.3-201ENST00000623525 224 ntBASIC0.46□□□□□ -2.34
AP1S1P61966 RNU4-76P-201ENST00000364509 141 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 RNU4-48P-201ENST00000365559 182 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 MIR200A-201ENST00000384875 90 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 MIR653-201ENST00000385279 96 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.45□□□□□ -2.34
AP1S1P61966 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.45□□□□□ -2.34
AP1S1P61966 AC245047.3-201ENST00000429428 127 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 snoU13.25-201ENST00000458945 104 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.45□□□□□ -2.34
AP1S1P61966 RNU6-917P-201ENST00000516294 104 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 RNU6-612P-201ENST00000516909 102 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.45□□□□□ -2.34
AP1S1P61966 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
AP1S1P61966 BNIP3P39-201ENST00000601077 554 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 AC146944.4-201ENST00000602697 718 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 MIR6515-201ENST00000619843 57 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 ELL2P3-201ENST00000457883 1602 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 MTND4P4-201ENST00000439033 1366 ntBASIC0.45□□□□□ -2.34
AP1S1P61966 RNU6-1097P-201ENST00000363586 107 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 Y_RNA.399-201ENST00000383955 105 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 SNORA80D-201ENST00000384488 135 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 RNU6-950P-201ENST00000384651 107 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 MIR586-201ENST00000385035 97 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 MIR660-201ENST00000385235 97 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 SNORA75.2-201ENST00000391138 150 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 SNORA75.3-201ENST00000391231 150 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 MRPL42P3-201ENST00000401492 326 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 RNU6-1186P-201ENST00000410429 97 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.44□□□□□ -2.34
AP1S1P61966 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
AP1S1P61966 MTND3P9-201ENST00000429526 346 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.44□□□□□ -2.34
AP1S1P61966 MTCO2P3-201ENST00000442543 421 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.44□□□□□ -2.34
AP1S1P61966 AC105417.1-201ENST00000514691 285 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.44□□□□□ -2.34
AP1S1P61966 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.44□□□□□ -2.34
AP1S1P61966 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 AL513423.1-201ENST00000621695 132 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
AP1S1P61966 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
AP1S1P61966 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
AP1S1P61966 RNU6-297P-201ENST00000384636 107 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 MIR936-201ENST00000401264 98 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 RNA5SP494-201ENST00000410653 129 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 RNA5SP504-201ENST00000410676 117 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.43□□□□□ -2.34
AP1S1P61966 RNU7-167P-201ENST00000459160 62 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 RNU7-21P-201ENST00000459430 62 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.43□□□□□ -2.34
AP1S1P61966 RNA5SP436-201ENST00000516020 115 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 RNU6-496P-201ENST00000516145 99 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 MTND2P32-201ENST00000521584 1038 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.43□□□□□ -2.34
AP1S1P61966 FRG2DP-202ENST00000566967 323 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 AC068790.6-201ENST00000602558 258 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 AL353765.1-201ENST00000605514 183 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 AC006566.1-201ENST00000608943 513 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 AC004223.4-201ENST00000612426 332 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 AL359075.3-201ENST00000613288 217 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 snoZ196.1-201ENST00000625269 89 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
AP1S1P61966 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms