Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MTCO2P30-201ENST00000503662 364 ntBASIC1.55□□□□□ -2.16
SRP54P61011 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.55□□□□□ -2.16
SRP54P61011 RNU6-344P-201ENST00000516635 111 ntBASIC1.55□□□□□ -2.16
SRP54P61011 RNA5SP437-201ENST00000517249 129 ntBASIC1.55□□□□□ -2.16
SRP54P61011 AC084364.2-201ENST00000546924 395 ntBASIC1.55□□□□□ -2.16
SRP54P61011 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.55□□□□□ -2.16
SRP54P61011 SNORA59B-202ENST00000578183 701 ntBASIC1.55□□□□□ -2.16
SRP54P61011 snoU13.31-201ENST00000607291 104 ntBASIC1.55□□□□□ -2.16
SRP54P61011 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SRP54P61011 RNU6-1252P-201ENST00000363054 104 ntBASIC1.54□□□□□ -2.16
SRP54P61011 SNORA72.2-201ENST00000365028 127 ntBASIC1.54□□□□□ -2.16
SRP54P61011 Y_RNA.414-201ENST00000384011 101 ntBASIC1.54□□□□□ -2.16
SRP54P61011 RNU6-245P-201ENST00000384020 107 ntBASIC1.54□□□□□ -2.16
SRP54P61011 Y_RNA.436-201ENST00000384097 102 ntBASIC1.54□□□□□ -2.16
SRP54P61011 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
SRP54P61011 RNU6-332P-201ENST00000391193 108 ntBASIC1.54□□□□□ -2.16
SRP54P61011 JTBP1-201ENST00000441314 247 ntBASIC1.54□□□□□ -2.16
SRP54P61011 MTND1P11-201ENST00000456661 876 ntBASIC1.54□□□□□ -2.16
SRP54P61011 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.54□□□□□ -2.16
SRP54P61011 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.54□□□□□ -2.16
SRP54P61011 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
SRP54P61011 POLR3GP2-201ENST00000588366 668 ntBASIC1.54□□□□□ -2.16
SRP54P61011 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
SRP54P61011 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.54□□□□□ -2.16
SRP54P61011 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
SRP54P61011 AL512598.1-201ENST00000610158 273 ntBASIC1.54□□□□□ -2.16
SRP54P61011 MIR338-201ENST00000636369 67 ntBASIC1.54□□□□□ -2.16
SRP54P61011 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SRP54P61011 Y_RNA.9-201ENST00000362354 101 ntBASIC1.53□□□□□ -2.16
SRP54P61011 RNU6-1090P-201ENST00000364065 94 ntBASIC1.53□□□□□ -2.16
SRP54P61011 RNU6-1305P-201ENST00000364353 104 ntBASIC1.53□□□□□ -2.16
SRP54P61011 MIR515-2-201ENST00000384883 83 ntBASIC1.53□□□□□ -2.16
SRP54P61011 MIR515-1-201ENST00000384884 83 ntBASIC1.53□□□□□ -2.16
SRP54P61011 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
SRP54P61011 MIR549A-201ENST00000385268 96 ntBASIC1.53□□□□□ -2.16
SRP54P61011 ZNF204P-201ENST00000416749 2397 ntBASIC1.53□□□□□ -2.16
SRP54P61011 AC016907.1-201ENST00000419483 435 ntBASIC1.53□□□□□ -2.16
SRP54P61011 AC016717.1-201ENST00000448918 286 ntBASIC1.53□□□□□ -2.16
SRP54P61011 ACA59.1-201ENST00000515966 143 ntBASIC1.53□□□□□ -2.16
SRP54P61011 RNU6-1146P-201ENST00000516282 102 ntBASIC1.53□□□□□ -2.16
SRP54P61011 RNU6-1198P-201ENST00000516904 67 ntBASIC1.53□□□□□ -2.16
SRP54P61011 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
SRP54P61011 EIF1P4-201ENST00000572664 335 ntBASIC1.53□□□□□ -2.16
SRP54P61011 SNORA77B-201ENST00000578179 125 ntBASIC1.53□□□□□ -2.16
SRP54P61011 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.53□□□□□ -2.16
SRP54P61011 AC126177.8-201ENST00000618339 1015 ntBASIC1.53□□□□□ -2.16
SRP54P61011 AC024614.3-201ENST00000637860 256 ntBASIC1.53□□□□□ -2.16
SRP54P61011 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SRP54P61011 snoU2-30.2-201ENST00000362805 70 ntBASIC1.52□□□□□ -2.17
SRP54P61011 RNY4P14-201ENST00000363656 96 ntBASIC1.52□□□□□ -2.17
SRP54P61011 SNORA67.2-201ENST00000384300 149 ntBASIC1.52□□□□□ -2.17
SRP54P61011 MIR517A-201ENST00000385001 87 ntBASIC1.52□□□□□ -2.17
SRP54P61011 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.52□□□□□ -2.17
SRP54P61011 AL590632.1-201ENST00000424289 371 ntBASIC1.52□□□□□ -2.17
SRP54P61011 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.52□□□□□ -2.17
SRP54P61011 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.52□□□□□ -2.17
SRP54P61011 RNU6-1053P-201ENST00000515930 101 ntBASIC1.52□□□□□ -2.17
SRP54P61011 MTND1P5-201ENST00000517906 940 ntBASIC1.52□□□□□ -2.17
SRP54P61011 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.52□□□□□ -2.17
SRP54P61011 MIR3672-201ENST00000584290 82 ntBASIC1.52□□□□□ -2.17
SRP54P61011 AC097065.2-201ENST00000608159 533 ntBASIC1.52□□□□□ -2.17
SRP54P61011 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.52□□□□□ -2.17
SRP54P61011 AL078596.1-201ENST00000624856 447 ntBASIC1.52□□□□□ -2.17
SRP54P61011 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.52□□□□□ -2.17
SRP54P61011 Y_RNA.67-201ENST00000362870 100 ntBASIC1.51□□□□□ -2.17
SRP54P61011 RNU6-137P-201ENST00000363680 108 ntBASIC1.51□□□□□ -2.17
SRP54P61011 Y_RNA.212-201ENST00000364177 102 ntBASIC1.51□□□□□ -2.17
SRP54P61011 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
SRP54P61011 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
SRP54P61011 SUB1P3-201ENST00000564581 315 ntBASIC1.51□□□□□ -2.17
SRP54P61011 AC015720.1-201ENST00000565251 277 ntBASIC1.51□□□□□ -2.17
SRP54P61011 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.51□□□□□ -2.17
SRP54P61011 AC124303.1-201ENST00000605703 360 ntBASIC1.51□□□□□ -2.17
SRP54P61011 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SRP54P61011 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.51□□□□□ -2.17
SRP54P61011 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SRP54P61011 MIR153-2-201ENST00000385225 87 ntBASIC1.5□□□□□ -2.17
SRP54P61011 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
SRP54P61011 AC007098.1-201ENST00000420122 367 ntBASIC1.5□□□□□ -2.17
SRP54P61011 Z82205.1-201ENST00000428456 297 ntBASIC1.5□□□□□ -2.17
SRP54P61011 HMGN2P34-201ENST00000437647 269 ntBASIC1.5□□□□□ -2.17
SRP54P61011 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
SRP54P61011 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.5□□□□□ -2.17
SRP54P61011 RNU7-57P-201ENST00000459540 60 ntBASIC1.5□□□□□ -2.17
SRP54P61011 RNU6-720P-201ENST00000516363 108 ntBASIC1.5□□□□□ -2.17
SRP54P61011 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
SRP54P61011 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.5□□□□□ -2.17
SRP54P61011 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.5□□□□□ -2.17
SRP54P61011 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.5□□□□□ -2.17
SRP54P61011 SNORD11B-201ENST00000607707 90 ntBASIC1.5□□□□□ -2.17
SRP54P61011 AC019193.3-201ENST00000609144 554 ntBASIC1.5□□□□□ -2.17
SRP54P61011 AC006504.8-201ENST00000621046 635 ntBASIC1.5□□□□□ -2.17
SRP54P61011 AC009033.1-201ENST00000624279 431 ntBASIC1.5□□□□□ -2.17
SRP54P61011 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SRP54P61011 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SRP54P61011 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
SRP54P61011 Y_RNA.573-201ENST00000384763 105 ntBASIC1.49□□□□□ -2.17
SRP54P61011 MIR32-201ENST00000384965 70 ntBASIC1.49□□□□□ -2.17
SRP54P61011 MIR487A-201ENST00000385009 80 ntBASIC1.49□□□□□ -2.17
SRP54P61011 MIR548B-201ENST00000385247 97 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms