Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC103975.1-201ENST00000482506 483 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 RPS29P20-201ENST00000489592 171 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 RNU5F-2P-201ENST00000516066 82 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.46□□□□□ -1.86
ERVFC1P60507 AC093732.2-201ENST00000607950 274 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 MIR7106-201ENST00000612419 65 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
ERVFC1P60507 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ERVFC1P60507 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ERVFC1P60507 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.46□□□□□ -1.86
ERVFC1P60507 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
ERVFC1P60507 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
ERVFC1P60507 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
ERVFC1P60507 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.45□□□□□ -1.86
ERVFC1P60507 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.45□□□□□ -1.86
ERVFC1P60507 AL513302.2-201ENST00000562313 1842 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 SNORA5B-201ENST00000363786 132 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 Y_RNA.243-201ENST00000364481 109 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 Y_RNA.368-201ENST00000365547 113 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 Y_RNA.415-201ENST00000384012 112 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 Y_RNA.542-201ENST00000384641 111 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 MIR616-201ENST00000385293 97 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 MIR526A2-201ENST00000390198 65 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 EI24P2-201ENST00000397776 1076 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 CBX3P9-201ENST00000402326 552 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 AC107083.1-201ENST00000439643 279 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.45□□□□□ -1.86
ERVFC1P60507 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.45□□□□□ -1.86
ERVFC1P60507 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.45□□□□□ -1.86
ERVFC1P60507 SNORA70.19-201ENST00000516717 90 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 AC011602.1-201ENST00000546484 331 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 MIR2682-201ENST00000580305 110 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 UBL5P2-201ENST00000583788 219 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 AL391903.3-201ENST00000612158 163 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 MIR3658-201ENST00000636291 56 ntBASIC3.45□□□□□ -1.86
ERVFC1P60507 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ERVFC1P60507 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.44□□□□□ -1.86
ERVFC1P60507 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
ERVFC1P60507 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ERVFC1P60507 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ERVFC1P60507 RNU6-270P-201ENST00000364131 105 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 Y_RNA.361-201ENST00000365515 120 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 Y_RNA.420-201ENST00000384043 110 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 AL031003.1-201ENST00000404229 172 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 RNA5SP201-201ENST00000410316 124 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.44□□□□□ -1.86
ERVFC1P60507 RNU6-1211P-201ENST00000459179 105 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 RPL31P41-201ENST00000477967 372 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 YWHAEP4-201ENST00000505390 198 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 Y_RNA.686-201ENST00000516548 134 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 RNU6-1234P-201ENST00000516877 103 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.44□□□□□ -1.86
ERVFC1P60507 AC112693.2-201ENST00000556538 232 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 Y_RNA.802-201ENST00000614892 130 ntBASIC3.44□□□□□ -1.86
ERVFC1P60507 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ERVFC1P60507 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.43□□□□□ -1.86
ERVFC1P60507 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ERVFC1P60507 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ERVFC1P60507 Y_RNA.456-201ENST00000384232 111 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 SNORA1.3-201ENST00000384676 136 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.43□□□□□ -1.86
ERVFC1P60507 SCARNA8-201ENST00000515924 131 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 RNU4-57P-201ENST00000515980 135 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 MIR3646-201ENST00000578301 84 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 MIR4672-201ENST00000583126 81 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.43□□□□□ -1.86
ERVFC1P60507 SNORD11B-201ENST00000607707 90 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 RNU6-91P-201ENST00000607774 107 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 PCGEM1.1-201ENST00000613431 131 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 CUL1P1-201ENST00000509510 2425 ntBASIC3.43□□□□□ -1.86
ERVFC1P60507 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ERVFC1P60507 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.42□□□□□ -1.86
ERVFC1P60507 RNU6-199P-201ENST00000362954 107 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 SNORA7.4-201ENST00000384249 137 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 SNORA20-201ENST00000384662 132 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 MIR184-201ENST00000384962 84 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ERVFC1P60507 snoU13.14-201ENST00000459372 104 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 RNU6-659P-201ENST00000516454 104 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
ERVFC1P60507 AL391813.1-201ENST00000603098 260 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 AC006023.1-201ENST00000603944 259 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 AL034555.1-201ENST00000604816 211 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 uc_338.1-201ENST00000612113 180 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 TCL6_2.1-201ENST00000615162 119 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 AP001340.1-201ENST00000624405 217 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 AC068205.3-201ENST00000636385 468 ntBASIC3.42□□□□□ -1.86
ERVFC1P60507 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.42□□□□□ -1.86
ERVFC1P60507 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ERVFC1P60507 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.41□□□□□ -1.86
ERVFC1P60507 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERVFC1P60507 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERVFC1P60507 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
ERVFC1P60507 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.41□□□□□ -1.86
ERVFC1P60507 RNU6-1048P-201ENST00000364054 107 ntBASIC3.41□□□□□ -1.86
ERVFC1P60507 RNU4-10P-201ENST00000364383 140 ntBASIC3.41□□□□□ -1.86
ERVFC1P60507 Y_RNA.293-201ENST00000364908 93 ntBASIC3.41□□□□□ -1.86
ERVFC1P60507 Y_RNA.310-201ENST00000365063 113 ntBASIC3.41□□□□□ -1.86
ERVFC1P60507 AC126124.2-201ENST00000413542 321 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms