Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.46□□□□□ -1.86
RTP1P59025 AL133475.1-201ENST00000404414 305 ntBASIC3.46□□□□□ -1.86
RTP1P59025 RNA5SP475-201ENST00000410568 110 ntBASIC3.46□□□□□ -1.86
RTP1P59025 RNA5SP184-201ENST00000411071 108 ntBASIC3.46□□□□□ -1.86
RTP1P59025 AC096649.2-201ENST00000416186 393 ntBASIC3.46□□□□□ -1.86
RTP1P59025 AC105272.1-201ENST00000438604 198 ntBASIC3.46□□□□□ -1.86
RTP1P59025 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.46□□□□□ -1.86
RTP1P59025 snoU13.28-201ENST00000459235 104 ntBASIC3.46□□□□□ -1.86
RTP1P59025 Y_RNA.637-201ENST00000459424 114 ntBASIC3.46□□□□□ -1.86
RTP1P59025 AC140059.1-201ENST00000489238 361 ntBASIC3.46□□□□□ -1.86
RTP1P59025 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.46□□□□□ -1.86
RTP1P59025 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
RTP1P59025 RNU6-436P-201ENST00000516171 114 ntBASIC3.46□□□□□ -1.86
RTP1P59025 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.46□□□□□ -1.86
RTP1P59025 MIR3923-201ENST00000579521 83 ntBASIC3.46□□□□□ -1.86
RTP1P59025 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTP1P59025 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.46□□□□□ -1.86
RTP1P59025 SNRPGP20-201ENST00000604477 205 ntBASIC3.46□□□□□ -1.86
RTP1P59025 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.46□□□□□ -1.86
RTP1P59025 MTND1P7-201ENST00000632801 297 ntBASIC3.46□□□□□ -1.86
RTP1P59025 U6.98-201ENST00000637157 84 ntBASIC3.46□□□□□ -1.86
RTP1P59025 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RTP1P59025 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTP1P59025 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.46□□□□□ -1.86
RTP1P59025 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTP1P59025 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTP1P59025 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTP1P59025 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.45□□□□□ -1.86
RTP1P59025 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.45□□□□□ -1.86
RTP1P59025 MIR148B-201ENST00000362252 99 ntBASIC3.45□□□□□ -1.86
RTP1P59025 RNA5SP383-201ENST00000362934 120 ntBASIC3.45□□□□□ -1.86
RTP1P59025 RNU6-529P-201ENST00000363383 104 ntBASIC3.45□□□□□ -1.86
RTP1P59025 Y_RNA.238-201ENST00000364441 102 ntBASIC3.45□□□□□ -1.86
RTP1P59025 Y_RNA.415-201ENST00000384012 112 ntBASIC3.45□□□□□ -1.86
RTP1P59025 SNORD15B-201ENST00000384714 146 ntBASIC3.45□□□□□ -1.86
RTP1P59025 RNU6-1248P-201ENST00000391096 64 ntBASIC3.45□□□□□ -1.86
RTP1P59025 MIR320B2-201ENST00000408479 138 ntBASIC3.45□□□□□ -1.86
RTP1P59025 RNU2-2P-201ENST00000410396 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 RPS12P18-201ENST00000442381 270 ntBASIC3.45□□□□□ -1.86
RTP1P59025 RNA5SP217-201ENST00000515959 91 ntBASIC3.45□□□□□ -1.86
RTP1P59025 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.45□□□□□ -1.86
RTP1P59025 RNU2-4P-201ENST00000606190 192 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.15-201ENST00000611544 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.16-201ENST00000613119 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.12-201ENST00000613778 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.9-201ENST00000615427 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.11-201ENST00000616345 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.2-201ENST00000616535 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.3-201ENST00000617785 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.19-201ENST00000618602 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 RNU2-1-201ENST00000618664 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.6-201ENST00000619225 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.5-201ENST00000619465 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 U2.10-201ENST00000620268 191 ntBASIC3.45□□□□□ -1.86
RTP1P59025 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RTP1P59025 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.45□□□□□ -1.86
RTP1P59025 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RTP1P59025 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RTP1P59025 AC062016.1-201ENST00000355719 319 ntBASIC3.44□□□□□ -1.86
RTP1P59025 Y_RNA.40-201ENST00000362645 93 ntBASIC3.44□□□□□ -1.86
RTP1P59025 RNU6-454P-201ENST00000364292 107 ntBASIC3.44□□□□□ -1.86
RTP1P59025 RNU6-312P-201ENST00000364629 107 ntBASIC3.44□□□□□ -1.86
RTP1P59025 Y_RNA.412-201ENST00000384001 104 ntBASIC3.44□□□□□ -1.86
RTP1P59025 SNORA1.3-201ENST00000384676 136 ntBASIC3.44□□□□□ -1.86
RTP1P59025 SNORA40.19-201ENST00000390846 128 ntBASIC3.44□□□□□ -1.86
RTP1P59025 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
RTP1P59025 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.44□□□□□ -1.86
RTP1P59025 AC245291.1-201ENST00000419501 328 ntBASIC3.44□□□□□ -1.86
RTP1P59025 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.44□□□□□ -1.86
RTP1P59025 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.44□□□□□ -1.86
RTP1P59025 HMGN2P20-201ENST00000437531 273 ntBASIC3.44□□□□□ -1.86
RTP1P59025 AC108938.1-201ENST00000451204 136 ntBASIC3.44□□□□□ -1.86
RTP1P59025 AC107626.1-201ENST00000471084 183 ntBASIC3.44□□□□□ -1.86
RTP1P59025 RNA5SP380-201ENST00000517190 98 ntBASIC3.44□□□□□ -1.86
RTP1P59025 RNU2-12P-201ENST00000517216 168 ntBASIC3.44□□□□□ -1.86
RTP1P59025 AC105137.2-201ENST00000569073 466 ntBASIC3.44□□□□□ -1.86
RTP1P59025 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.44□□□□□ -1.86
RTP1P59025 AL034555.1-201ENST00000604816 211 ntBASIC3.44□□□□□ -1.86
RTP1P59025 XIST_intron.1-201ENST00000619444 68 ntBASIC3.44□□□□□ -1.86
RTP1P59025 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.44□□□□□ -1.86
RTP1P59025 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.43□□□□□ -1.86
RTP1P59025 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RTP1P59025 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.43□□□□□ -1.86
RTP1P59025 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RTP1P59025 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTP1P59025 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTP1P59025 RNU6-1117P-201ENST00000384525 104 ntBASIC3.43□□□□□ -1.86
RTP1P59025 MIR186-201ENST00000384988 86 ntBASIC3.43□□□□□ -1.86
RTP1P59025 U3.40-201ENST00000408706 208 ntBASIC3.43□□□□□ -1.86
RTP1P59025 RNA5SP201-201ENST00000410316 124 ntBASIC3.43□□□□□ -1.86
RTP1P59025 AC004866.1-201ENST00000411748 78 ntBASIC3.43□□□□□ -1.86
RTP1P59025 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.43□□□□□ -1.86
RTP1P59025 PTGES3P4-201ENST00000426243 356 ntBASIC3.43□□□□□ -1.86
RTP1P59025 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.43□□□□□ -1.86
RTP1P59025 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTP1P59025 SNORA64.4-201ENST00000516632 81 ntBASIC3.43□□□□□ -1.86
RTP1P59025 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.43□□□□□ -1.86
RTP1P59025 AC009127.3-201ENST00000570531 403 ntBASIC3.43□□□□□ -1.86
RTP1P59025 MIR4474-201ENST00000579189 78 ntBASIC3.43□□□□□ -1.86
RTP1P59025 RPS15AP11-201ENST00000594193 385 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms