Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL132765.2-201ENST00000610812 351 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 RMST_6.1-201ENST00000611980 203 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 AC005296.1-201ENST00000616145 209 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HMGCS2P54868 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.13
HMGCS2P54868 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
HMGCS2P54868 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
HMGCS2P54868 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMGCS2P54868 Y_RNA.48-201ENST00000362710 103 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 Y_RNA.269-201ENST00000364685 89 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 RNU6-546P-201ENST00000383991 107 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 RNU6-601P-201ENST00000384540 107 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 RPS26P42-201ENST00000413485 326 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 MTND4LP11-201ENST00000422184 280 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGCS2P54868 CBX3P6-201ENST00000430257 527 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGCS2P54868 AC087477.1-201ENST00000465747 340 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 MIR449C-201ENST00000516047 92 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 RNU6-567P-201ENST00000516746 107 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 Y_RNA.702-201ENST00000516843 96 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 SNORA31.24-201ENST00000517232 57 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 NDUFA5P6-201ENST00000542110 379 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 EIF4A1P12-201ENST00000551910 141 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.77□□□□□ -2.13
HMGCS2P54868 AC243960.4-201ENST00000600532 288 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 SNRPGP17-201ENST00000603780 214 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 AC009229.3-201ENST00000608056 282 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 SCARNA4-201ENST00000629045 128 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 CENPCP1-201ENST00000533085 2578 ntBASIC1.77□□□□□ -2.13
HMGCS2P54868 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGCS2P54868 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMGCS2P54868 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HMGCS2P54868 RNA5SP276-201ENST00000362580 94 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 U3.9-201ENST00000363823 204 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 RNU4-56P-201ENST00000364700 142 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 MIR208B-201ENST00000401172 77 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 RNA5SP494-201ENST00000410653 129 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.76□□□□□ -2.13
HMGCS2P54868 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 AL137159.1-201ENST00000452808 512 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 RPL7P42-201ENST00000481005 679 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 FGF7P4-201ENST00000509595 295 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGCS2P54868 RNA5SP384-201ENST00000516615 116 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 RNU6-1213P-201ENST00000517075 94 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 RNU6-667P-201ENST00000517186 102 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 DEFB131C-201ENST00000528817 165 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 CBX3P8-201ENST00000532412 525 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGCS2P54868 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGCS2P54868 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 AC099654.5-201ENST00000636479 350 ntBASIC1.76□□□□□ -2.13
HMGCS2P54868 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMGCS2P54868 Y_RNA.70-201ENST00000362886 110 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 RNU6-595P-201ENST00000363944 107 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 Y_RNA.508-201ENST00000384502 114 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 MIR549A-201ENST00000385268 96 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HMGCS2P54868 RNU2-41P-201ENST00000410991 178 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 NCOR1P3-201ENST00000420479 303 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGCS2P54868 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGCS2P54868 OR2AQ1P-201ENST00000451972 200 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 RPL30P10-201ENST00000488148 337 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.75□□□□□ -2.13
HMGCS2P54868 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 Y_RNA.708-201ENST00000516950 96 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 APOOP3-201ENST00000536787 586 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGCS2P54868 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGCS2P54868 MIR4273-201ENST00000582824 84 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 LARP7P1-201ENST00000605576 316 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 AC005014.2-201ENST00000607795 599 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.75□□□□□ -2.13
HMGCS2P54868 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMGCS2P54868 RNU6-1188P-201ENST00000363795 107 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 Y_RNA.263-201ENST00000364659 114 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 Y_RNA.355-201ENST00000365462 98 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 RNU6-26P-201ENST00000383985 107 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 RNU6-611P-201ENST00000384276 104 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 Y_RNA.529-201ENST00000384586 119 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 RNU6-331P-201ENST00000384724 107 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 MIR518A2-201ENST00000384966 87 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 RNU6-1093P-201ENST00000391194 107 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 SNORA75.4-201ENST00000391278 119 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 RNA5SP450-201ENST00000411206 102 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 RNU6-1304P-201ENST00000411374 106 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 AL158823.1-201ENST00000418441 478 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 AL590556.1-201ENST00000423231 483 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 AL354695.1-201ENST00000427935 228 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 Y_RNA.635-201ENST00000459041 101 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 AC007215.1-201ENST00000464893 276 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 ATP5EP1-201ENST00000510257 156 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 ANP32BP3-201ENST00000559213 706 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 MIR4299-201ENST00000577899 72 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 MIR5701-3-201ENST00000578890 82 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms