Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AL135938.1-201ENST00000443141 297 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.14□□□□□ -1.91
ATXN1P54253 HMGN2P10-201ENST00000448085 265 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.14□□□□□ -1.91
ATXN1P54253 U8.22-201ENST00000459141 133 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 AC068657.1-201ENST00000520807 306 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 CYCSP26-201ENST00000534107 320 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 AC103810.1-201ENST00000579873 453 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 MIR4282-201ENST00000583613 67 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 AC097372.5-201ENST00000623665 376 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 MTND1P7-201ENST00000632801 297 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 ZNF299P-201ENST00000406845 1804 ntBASIC3.14□□□□□ -1.91
ATXN1P54253 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATXN1P54253 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ATXN1P54253 Y_RNA.238-201ENST00000364441 102 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 RNU6-1180P-201ENST00000364935 107 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 MIR628-201ENST00000385229 95 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 AL512633.1-201ENST00000399931 655 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 RPS29P27-201ENST00000463711 170 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 RPL30P1-201ENST00000488676 339 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.13□□□□□ -1.91
ATXN1P54253 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.13□□□□□ -1.91
ATXN1P54253 DEFB131C-201ENST00000528817 165 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.13□□□□□ -1.91
ATXN1P54253 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATXN1P54253 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
ATXN1P54253 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.13□□□□□ -1.91
ATXN1P54253 AL162424.1-201ENST00000602325 221 ntBASIC3.13□□□□□ -1.91
ATXN1P54253 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATXN1P54253 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.12□□□□□ -1.91
ATXN1P54253 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ATXN1P54253 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.12□□□□□ -1.91
ATXN1P54253 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
ATXN1P54253 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 Y_RNA.123-201ENST00000363338 102 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 RNU6-755P-201ENST00000364400 103 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 Y_RNA.439-201ENST00000384119 94 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 SNORA69.1-201ENST00000390904 137 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 BTF3L4P2-201ENST00000392798 346 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 RNU6-1245P-201ENST00000411130 106 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 EBAG9P1-201ENST00000418955 543 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 AC105272.1-201ENST00000438604 198 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 RNU7-107P-201ENST00000459121 61 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 RNU6-581P-201ENST00000516214 105 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 Y_RNA.709-201ENST00000516952 92 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 AC006199.1-201ENST00000548728 219 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 MIR5701-3-201ENST00000578890 82 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 MIR5701-1-201ENST00000585138 82 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.12□□□□□ -1.91
ATXN1P54253 MIR5701-2-201ENST00000615634 82 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.12□□□□□ -1.91
ATXN1P54253 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATXN1P54253 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
ATXN1P54253 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATXN1P54253 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 AL596211.1-201ENST00000569873 2277 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATXN1P54253 SNORD56.5-201ENST00000364281 72 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 Y_RNA.309-201ENST00000365046 111 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RNU6-290P-201ENST00000365212 101 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RNU6-1056P-201ENST00000383996 107 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 Y_RNA.542-201ENST00000384641 111 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 MIR627-201ENST00000384979 97 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 SNORA40-201ENST00000388090 126 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATXN1P54253 FO393413.1-201ENST00000402892 195 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 FTH1P15-201ENST00000406984 280 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 MIR1302-4-201ENST00000408701 150 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RNY4P29-201ENST00000410801 97 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RNA5SP247-201ENST00000411181 105 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATXN1P54253 AL161651.1-201ENST00000440882 223 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 MTCO1P44-201ENST00000441935 243 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 AC009237.7-201ENST00000447357 229 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RPL23AP70-201ENST00000483361 460 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 SNORA25.12-201ENST00000516202 82 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RNU6-659P-201ENST00000516454 104 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RNU6-638P-201ENST00000516582 104 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 SNORD19.2-201ENST00000516978 73 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 RNU6-762P-201ENST00000517107 102 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATXN1P54253 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.11□□□□□ -1.91
ATXN1P54253 MIR5696-201ENST00000578474 85 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 AL008718.3-201ENST00000610217 321 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 AC009318.2-201ENST00000610917 651 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 snoZ196.1-201ENST00000625269 89 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 MIR7515-201ENST00000637837 67 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 AC241585.2-209ENST00000638217 143 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 AC233981.2-201ENST00000611524 1614 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.11□□□□□ -1.91
ATXN1P54253 AC069528.2-201ENST00000624849 1991 ntBASIC3.11□□□□□ -1.91
ATXN1P54253 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.1□□□□□ -1.91
ATXN1P54253 Y_RNA.27-201ENST00000362540 103 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 Y_RNA.590-201ENST00000410140 107 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms