Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 Y_RNA.2-201ENST00000362330 96 ntBASIC1.96□□□□□ -2.1
LIMK1P53667 RNU1-76P-201ENST00000362903 159 ntBASIC1.96□□□□□ -2.1
LIMK1P53667 RNA5SP493-201ENST00000364115 91 ntBASIC1.96□□□□□ -2.1
LIMK1P53667 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LIMK1P53667 MIR1283-2-201ENST00000408621 87 ntBASIC1.96□□□□□ -2.1
LIMK1P53667 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.96□□□□□ -2.1
LIMK1P53667 MTCO3P8-201ENST00000453691 755 ntBASIC1.96□□□□□ -2.1
LIMK1P53667 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LIMK1P53667 RNU7-175P-201ENST00000515915 61 ntBASIC1.96□□□□□ -2.1
LIMK1P53667 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.96□□□□□ -2.1
LIMK1P53667 HSBP1P1-201ENST00000555205 166 ntBASIC1.96□□□□□ -2.1
LIMK1P53667 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.96□□□□□ -2.1
LIMK1P53667 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.96□□□□□ -2.1
LIMK1P53667 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LIMK1P53667 Y_RNA.48-201ENST00000362710 103 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 SNORD114-6-201ENST00000364393 72 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 Y_RNA.533-201ENST00000384596 114 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 MIR487A-201ENST00000385009 80 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 MIR300-201ENST00000401138 83 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 RPL37P10-201ENST00000412884 288 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.95□□□□□ -2.1
LIMK1P53667 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.95□□□□□ -2.1
LIMK1P53667 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.95□□□□□ -2.1
LIMK1P53667 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.95□□□□□ -2.1
LIMK1P53667 AC007395.1-201ENST00000451333 677 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.95□□□□□ -2.1
LIMK1P53667 SNORD13-201ENST00000459299 104 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.95□□□□□ -2.1
LIMK1P53667 RNA5SP54-201ENST00000516951 92 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 SNORA44.1-201ENST00000517031 108 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.95□□□□□ -2.1
LIMK1P53667 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 AL359697.1-201ENST00000624879 587 ntBASIC1.95□□□□□ -2.1
LIMK1P53667 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.95□□□□□ -2.1
LIMK1P53667 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LIMK1P53667 RNU6-845P-201ENST00000362578 103 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 MIR153-2-201ENST00000385225 87 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 SNORA12.2-201ENST00000391040 156 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LIMK1P53667 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.94□□□□□ -2.1
LIMK1P53667 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.94□□□□□ -2.1
LIMK1P53667 RPL23AP63-201ENST00000498752 471 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 PRDX4P1-201ENST00000507189 574 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 AC010928.2-201ENST00000588017 287 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 AC012493.3-201ENST00000604494 112 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 PISRT1.1-201ENST00000616930 107 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
LIMK1P53667 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.94□□□□□ -2.1
LIMK1P53667 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LIMK1P53667 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LIMK1P53667 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LIMK1P53667 RNU6-596P-201ENST00000365395 98 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 Y_RNA.473-201ENST00000384333 102 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 RNU6-601P-201ENST00000384540 107 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 MIR548K-201ENST00000408406 116 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 RNU4-62P-201ENST00000410125 130 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 RPL21P111-201ENST00000418453 477 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.93□□□□□ -2.1
LIMK1P53667 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.93□□□□□ -2.1
LIMK1P53667 SNORD5.1-201ENST00000458800 75 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 AC007215.1-201ENST00000464893 276 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 RNU6-1016P-201ENST00000516689 94 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.93□□□□□ -2.1
LIMK1P53667 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 AL590705.4-201ENST00000532209 134 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 RRN3P3-201ENST00000549207 578 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 MIR5696-201ENST00000578474 85 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LIMK1P53667 ZNF299P-201ENST00000406845 1804 ntBASIC1.93□□□□□ -2.1
LIMK1P53667 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LIMK1P53667 AL159152.1-201ENST00000635019 2587 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LIMK1P53667 RNU6-1305P-201ENST00000364353 104 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 Y_RNA.319-201ENST00000365138 92 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 RNU6-418P-201ENST00000384035 107 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 RNU6-842P-201ENST00000384269 107 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 MIR1283-1-201ENST00000408494 87 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 RNU6-1050P-201ENST00000410388 107 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 RNU6-174P-201ENST00000410406 106 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LIMK1P53667 USMG5P1-201ENST00000425964 177 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 AL445305.1-201ENST00000432577 575 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 RPL23AP50-201ENST00000434149 455 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 AC009237.7-201ENST00000447357 229 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 AC074290.1-201ENST00000448883 135 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 AC016925.1-201ENST00000458303 298 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 AC027575.1-201ENST00000481064 460 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.92□□□□□ -2.1
LIMK1P53667 AC008834.1-201ENST00000511612 175 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 SNORA25.14-201ENST00000516481 132 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 RNU6-58P-201ENST00000517143 103 ntBASIC1.92□□□□□ -2.1
LIMK1P53667 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms