Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR1244-4-202ENST00000636813 85 ntBASIC2.51□□□□□ -2.01
NEK3P51956 MTND5P35-201ENST00000557537 1720 ntBASIC2.51□□□□□ -2.01
NEK3P51956 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
NEK3P51956 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NEK3P51956 SNORD114-6-201ENST00000364393 72 ntBASIC2.5□□□□□ -2.01
NEK3P51956 Y_RNA.358-201ENST00000365491 99 ntBASIC2.5□□□□□ -2.01
NEK3P51956 SNORA67.4-201ENST00000384688 142 ntBASIC2.5□□□□□ -2.01
NEK3P51956 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.5□□□□□ -2.01
NEK3P51956 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.5□□□□□ -2.01
NEK3P51956 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.5□□□□□ -2.01
NEK3P51956 RN7SKP49-201ENST00000516675 260 ntBASIC2.5□□□□□ -2.01
NEK3P51956 RNU1-117P-201ENST00000517041 158 ntBASIC2.5□□□□□ -2.01
NEK3P51956 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.49□□□□□ -2.01
NEK3P51956 Y_RNA.58-201ENST00000362807 102 ntBASIC2.49□□□□□ -2.01
NEK3P51956 Y_RNA.154-201ENST00000363624 102 ntBASIC2.49□□□□□ -2.01
NEK3P51956 RNY3P1-201ENST00000365085 102 ntBASIC2.49□□□□□ -2.01
NEK3P51956 RNY3-201ENST00000365484 102 ntBASIC2.49□□□□□ -2.01
NEK3P51956 Y_RNA.428-201ENST00000384078 102 ntBASIC2.49□□□□□ -2.01
NEK3P51956 Y_RNA.509-201ENST00000384506 99 ntBASIC2.49□□□□□ -2.01
NEK3P51956 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
NEK3P51956 Y_RNA.592-201ENST00000410274 109 ntBASIC2.49□□□□□ -2.01
NEK3P51956 RNA5SP504-201ENST00000410676 117 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AC009963.1-201ENST00000417265 157 ntBASIC2.49□□□□□ -2.01
NEK3P51956 MTND4P28-201ENST00000426217 387 ntBASIC2.49□□□□□ -2.01
NEK3P51956 HMGN2P3-201ENST00000433603 273 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.49□□□□□ -2.01
NEK3P51956 HMGN2P5-201ENST00000436882 273 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AC007677.1-201ENST00000445757 515 ntBASIC2.49□□□□□ -2.01
NEK3P51956 RNU7-57P-201ENST00000459540 60 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AC074133.1-201ENST00000515696 183 ntBASIC2.49□□□□□ -2.01
NEK3P51956 RNU6-1170P-201ENST00000515974 106 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.49□□□□□ -2.01
NEK3P51956 AP002770.2-201ENST00000543613 532 ntBASIC2.49□□□□□ -2.01
NEK3P51956 MIR4298-201ENST00000584380 73 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AC125232.2-201ENST00000592457 143 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AL590240.4-201ENST00000616908 390 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AC087588.2-201ENST00000617667 426 ntBASIC2.49□□□□□ -2.01
NEK3P51956 snoZ196.1-201ENST00000625269 89 ntBASIC2.49□□□□□ -2.01
NEK3P51956 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NEK3P51956 RNU6-1115P-201ENST00000362490 106 ntBASIC2.48□□□□□ -2.01
NEK3P51956 RNA5SP456-201ENST00000364002 114 ntBASIC2.48□□□□□ -2.01
NEK3P51956 XGY1-201ENST00000381172 446 ntBASIC2.48□□□□□ -2.01
NEK3P51956 RNU6-1145P-201ENST00000384246 107 ntBASIC2.48□□□□□ -2.01
NEK3P51956 Y_RNA.463-201ENST00000384271 102 ntBASIC2.48□□□□□ -2.01
NEK3P51956 MIR329-1-201ENST00000385028 80 ntBASIC2.48□□□□□ -2.01
NEK3P51956 AL359511.1-201ENST00000402970 211 ntBASIC2.48□□□□□ -2.01
NEK3P51956 AL512604.1-201ENST00000404812 257 ntBASIC2.48□□□□□ -2.01
NEK3P51956 AC008134.1-201ENST00000420943 193 ntBASIC2.48□□□□□ -2.01
NEK3P51956 SNORD116.3-201ENST00000517176 78 ntBASIC2.48□□□□□ -2.01
NEK3P51956 SUMO2P18-201ENST00000518873 252 ntBASIC2.48□□□□□ -2.01
NEK3P51956 MYL12BP1-201ENST00000569826 507 ntBASIC2.48□□□□□ -2.01
NEK3P51956 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.48□□□□□ -2.01
NEK3P51956 AL353149.1-201ENST00000610667 244 ntBASIC2.48□□□□□ -2.01
NEK3P51956 AL138825.1-201ENST00000618587 192 ntBASIC2.48□□□□□ -2.01
NEK3P51956 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.48□□□□□ -2.01
NEK3P51956 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.48□□□□□ -2.01
NEK3P51956 AL159152.1-201ENST00000635019 2587 ntBASIC2.48□□□□□ -2.01
NEK3P51956 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.47□□□□□ -2.01
NEK3P51956 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
NEK3P51956 RNU6-879P-201ENST00000364328 108 ntBASIC2.47□□□□□ -2.01
NEK3P51956 Y_RNA.252-201ENST00000364556 101 ntBASIC2.47□□□□□ -2.01
NEK3P51956 RNU6-418P-201ENST00000384035 107 ntBASIC2.47□□□□□ -2.01
NEK3P51956 RNU6-1001P-201ENST00000411265 100 ntBASIC2.47□□□□□ -2.01
NEK3P51956 AL445305.1-201ENST00000432577 575 ntBASIC2.47□□□□□ -2.01
NEK3P51956 AC010095.1-201ENST00000443543 144 ntBASIC2.47□□□□□ -2.01
NEK3P51956 RNU6-221P-201ENST00000459541 99 ntBASIC2.47□□□□□ -2.01
NEK3P51956 RNU6-120P-201ENST00000516077 103 ntBASIC2.47□□□□□ -2.01
NEK3P51956 RNU6-699P-201ENST00000517081 110 ntBASIC2.47□□□□□ -2.01
NEK3P51956 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.47□□□□□ -2.01
NEK3P51956 MZT1P2-201ENST00000604387 248 ntBASIC2.47□□□□□ -2.01
NEK3P51956 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
NEK3P51956 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.47□□□□□ -2.01
NEK3P51956 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.47□□□□□ -2.01
NEK3P51956 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
NEK3P51956 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.47□□□□□ -2.01
NEK3P51956 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
NEK3P51956 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NEK3P51956 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.47□□□□□ -2.01
NEK3P51956 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
NEK3P51956 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.01
NEK3P51956 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.46□□□□□ -2.01
NEK3P51956 Y_RNA.61-201ENST00000362835 102 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RNU6-797P-201ENST00000363101 109 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RNU1-115P-201ENST00000365329 160 ntBASIC2.46□□□□□ -2.02
NEK3P51956 Y_RNA.605-201ENST00000410577 105 ntBASIC2.46□□□□□ -2.02
NEK3P51956 AL158823.1-201ENST00000418441 478 ntBASIC2.46□□□□□ -2.02
NEK3P51956 TOMM22P2-201ENST00000430735 237 ntBASIC2.46□□□□□ -2.02
NEK3P51956 ATP5J2P3-201ENST00000451550 258 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RN7SL429P-201ENST00000479090 223 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RN7SL489P-201ENST00000486185 223 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RN7SL327P-201ENST00000488659 223 ntBASIC2.46□□□□□ -2.02
NEK3P51956 AC234781.5-201ENST00000508429 271 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RNU6-1146P-201ENST00000516282 102 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RNA5SP24-201ENST00000516478 95 ntBASIC2.46□□□□□ -2.02
NEK3P51956 AC022868.1-201ENST00000517767 391 ntBASIC2.46□□□□□ -2.02
NEK3P51956 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.46□□□□□ -2.02
NEK3P51956 AC013412.1-201ENST00000610687 192 ntBASIC2.46□□□□□ -2.02
NEK3P51956 RN7SL853P-201ENST00000617250 223 ntBASIC2.46□□□□□ -2.02
NEK3P51956 AL590808.1-201ENST00000618696 141 ntBASIC2.46□□□□□ -2.02
NEK3P51956 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms