Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRIM1P49642 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRIM1P49642 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRIM1P49642 AC010889.1-201ENST00000566193 2666 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRIM1P49642 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRIM1P49642 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRIM1P49642 RNA5SP322-201ENST00000363617 119 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 RNU4-13P-201ENST00000364019 141 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 SNORA72-201ENST00000384339 132 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 SNORD116-13-201ENST00000384408 92 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 MIR29B2-201ENST00000385055 81 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PRIM1P49642 RPL23AP48-201ENST00000406913 488 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 U6atac.2-201ENST00000408644 118 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 RPL21P10-201ENST00000463521 490 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 SNORA18.4-201ENST00000516440 124 ntBASIC4.85□□□□□ -1.63
PRIM1P49642 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.85□□□□□ -1.63
PRIM1P49642 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PRIM1P49642 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.84□□□□□ -1.63
PRIM1P49642 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.84□□□□□ -1.63
PRIM1P49642 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRIM1P49642 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRIM1P49642 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PRIM1P49642 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRIM1P49642 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRIM1P49642 RNU1-33P-201ENST00000364249 162 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 RNY4P30-201ENST00000410216 95 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 AC023141.4-201ENST00000412031 328 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 AL353705.1-201ENST00000433468 480 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 snoU13.28-201ENST00000459235 104 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 AP001486.1-201ENST00000463339 476 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 AL049873.1-201ENST00000480540 376 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 SNORD77.4-201ENST00000516158 81 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 AC105245.1-201ENST00000581934 244 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 uc_338.14-201ENST00000613162 166 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 uc_338.4-201ENST00000616635 176 ntBASIC4.84□□□□□ -1.63
PRIM1P49642 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRIM1P49642 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
PRIM1P49642 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.84□□□□□ -1.64
PRIM1P49642 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRIM1P49642 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
PRIM1P49642 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.83□□□□□ -1.64
PRIM1P49642 MIR450A1-201ENST00000362262 91 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 Y_RNA.281-201ENST00000364774 94 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 RNU6-1336P-201ENST00000383886 109 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 RNU1-89P-201ENST00000384592 164 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 MIR548A1-201ENST00000385041 97 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 MIR624-201ENST00000385217 97 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 AC005326.1-201ENST00000429197 123 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 RNU7-57P-201ENST00000459540 60 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 AL049861.1-201ENST00000603130 150 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 AL137849.1-201ENST00000604767 169 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 AL591424.2-201ENST00000617023 128 ntBASIC4.83□□□□□ -1.64
PRIM1P49642 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRIM1P49642 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.83□□□□□ -1.64
PRIM1P49642 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRIM1P49642 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.82□□□□□ -1.64
PRIM1P49642 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PRIM1P49642 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.82□□□□□ -1.64
PRIM1P49642 Y_RNA.634-201ENST00000364811 113 ntBASIC4.82□□□□□ -1.64
PRIM1P49642 DYNLT3P1-201ENST00000378574 347 ntBASIC4.82□□□□□ -1.64
PRIM1P49642 RNU6-750P-201ENST00000390946 107 ntBASIC4.82□□□□□ -1.64
PRIM1P49642 MIR1283-1-201ENST00000408494 87 ntBASIC4.82□□□□□ -1.64
PRIM1P49642 RNA5SP127-201ENST00000411051 133 ntBASIC4.82□□□□□ -1.64
PRIM1P49642 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.82□□□□□ -1.64
PRIM1P49642 AC107934.2-201ENST00000518653 310 ntBASIC4.82□□□□□ -1.64
PRIM1P49642 AC018630.3-201ENST00000542637 96 ntBASIC4.82□□□□□ -1.64
PRIM1P49642 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.82□□□□□ -1.64
PRIM1P49642 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.82□□□□□ -1.64
PRIM1P49642 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PRIM1P49642 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRIM1P49642 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRIM1P49642 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
PRIM1P49642 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PRIM1P49642 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRIM1P49642 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRIM1P49642 MTND5P18-201ENST00000445624 1801 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRIM1P49642 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRIM1P49642 SNORD32B-201ENST00000364460 84 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.81□□□□□ -1.64
PRIM1P49642 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.81□□□□□ -1.64
PRIM1P49642 RNU6-221P-201ENST00000459541 99 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 RN7SL807P-201ENST00000470923 297 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 S100A11P1-201ENST00000477525 312 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 RNA5SP20-201ENST00000515976 84 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 RNA5SP208-201ENST00000516156 78 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 SNORA70.18-201ENST00000516696 98 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 RN7SKP289-201ENST00000517244 295 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 AC079598.5-201ENST00000547460 117 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 HSPE1P7-201ENST00000604681 321 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 YPEL5P2-201ENST00000605553 359 ntBASIC4.81□□□□□ -1.64
PRIM1P49642 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.81□□□□□ -1.64
PRIM1P49642 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRIM1P49642 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRIM1P49642 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PRIM1P49642 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms