Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.18□□□□□ -2.22
UBE2AP49459 SNORA77B-201ENST00000578179 125 ntBASIC1.18□□□□□ -2.22
UBE2AP49459 AC060780.3-201ENST00000589464 80 ntBASIC1.18□□□□□ -2.22
UBE2AP49459 AC011494.1-201ENST00000596454 237 ntBASIC1.18□□□□□ -2.22
UBE2AP49459 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
UBE2AP49459 AC010615.1-201ENST00000594254 1764 ntBASIC1.18□□□□□ -2.22
UBE2AP49459 AC027514.1-201ENST00000588561 1603 ntBASIC1.18□□□□□ -2.22
UBE2AP49459 MIR126-201ENST00000362291 85 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNU6-874P-201ENST00000362390 105 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNU6-595P-201ENST00000363944 107 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 SNORA16.1-201ENST00000364597 132 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNU6-596P-201ENST00000365395 98 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 Y_RNA.405-201ENST00000383979 100 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNU6-245P-201ENST00000384020 107 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 Y_RNA.451-201ENST00000384200 100 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 Y_RNA.524-201ENST00000384564 100 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 Y_RNA.561-201ENST00000384694 100 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 MIR30A-201ENST00000385092 71 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 MIR153-2-201ENST00000385225 87 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNA5SP213-201ENST00000391031 106 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNU6-159P-201ENST00000391080 106 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 SNORA3.2-201ENST00000408221 125 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 MIR548K-201ENST00000408406 116 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 MIR548F5-201ENST00000408421 86 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNU6-955P-201ENST00000410497 104 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.17□□□□□ -2.22
UBE2AP49459 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.17□□□□□ -2.22
UBE2AP49459 EIF1P1-201ENST00000421436 341 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AL445646.1-201ENST00000431784 216 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 MTND4LP16-201ENST00000440828 295 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AL606517.2-201ENST00000442855 241 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.17□□□□□ -2.22
UBE2AP49459 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.17□□□□□ -2.22
UBE2AP49459 RNU1-98P-201ENST00000458992 160 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RPL26P26-201ENST00000480251 434 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.17□□□□□ -2.22
UBE2AP49459 AC116337.1-201ENST00000509680 687 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AC008549.1-201ENST00000512900 643 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AC026782.1-201ENST00000512952 449 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 RNU6-948P-201ENST00000516374 107 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 SNORA25.14-201ENST00000516481 132 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AF235103.2-201ENST00000525753 346 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.17□□□□□ -2.22
UBE2AP49459 AC024614.2-201ENST00000577584 372 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 MIR5089-201ENST00000580047 84 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 MIR3618-201ENST00000580330 88 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AC116312.1-201ENST00000606841 314 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 AL355802.3-201ENST00000607571 545 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 SNORD11B-201ENST00000607707 90 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.17□□□□□ -2.22
UBE2AP49459 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
UBE2AP49459 AL078596.1-201ENST00000624856 447 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 U6.108-201ENST00000637764 58 ntBASIC1.17□□□□□ -2.22
UBE2AP49459 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.17□□□□□ -2.22
UBE2AP49459 Y_RNA.184-201ENST00000363884 108 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 RNU6-1019P-201ENST00000364424 107 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 Y_RNA.339-201ENST00000365325 102 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 XGY1-201ENST00000381172 446 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 RNU6-203P-201ENST00000384038 104 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 RNU6-417P-201ENST00000384712 107 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 MIR520A-201ENST00000384862 85 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 RNU6-192P-201ENST00000391253 100 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 RNA5SP467-201ENST00000391274 118 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.16□□□□□ -2.22
UBE2AP49459 AL033519.2-201ENST00000403958 392 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 FCF1P9-201ENST00000412546 282 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AL161935.2-201ENST00000414627 60 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 CST2P1-201ENST00000425770 87 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 MTND3P23-201ENST00000431980 347 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.16□□□□□ -2.22
UBE2AP49459 FGF7P6-202ENST00000451282 293 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 Y_RNA.670-201ENST00000516255 105 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 RNU6-358P-201ENST00000516564 75 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 RNA5SP54-201ENST00000516951 92 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AC025647.1-201ENST00000517879 253 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.16□□□□□ -2.22
UBE2AP49459 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.16□□□□□ -2.22
UBE2AP49459 MZT1P2-201ENST00000604387 248 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AC018462.2-201ENST00000605375 395 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AC005014.2-201ENST00000607795 599 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.16□□□□□ -2.22
UBE2AP49459 snoZ196.1-201ENST00000625269 89 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
UBE2AP49459 ZNF299P-201ENST00000406845 1804 ntBASIC1.16□□□□□ -2.22
UBE2AP49459 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UBE2AP49459 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UBE2AP49459 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
UBE2AP49459 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
UBE2AP49459 MIR302D-201ENST00000362275 68 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 MIR583-201ENST00000384846 75 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 PPP1R2P5-201ENST00000457256 603 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 RNU6-221P-201ENST00000459541 99 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 AC114982.1-201ENST00000469402 321 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 AC025465.3-201ENST00000510570 311 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 RNU6-970P-201ENST00000516312 107 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 RNU7-128P-201ENST00000517247 62 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 FRG2DP-202ENST00000566967 323 ntBASIC1.15□□□□□ -2.23
UBE2AP49459 MIR5701-3-201ENST00000578890 82 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms