Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CR383656.4-201ENST00000546909 122 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AC006600.1-201ENST00000572529 153 ntBASIC-0.6□□□□□ -2.51
HTTP42858 TMF1P1-201ENST00000576058 373 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AL139286.2-201ENST00000606838 396 ntBASIC-0.6□□□□□ -2.51
HTTP42858 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.6□□□□□ -2.51
HTTP42858 RNU6-24P-201ENST00000384440 107 ntBASIC-0.6□□□□□ -2.51
HTTP42858 SNORA2B-201ENST00000384583 137 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.6□□□□□ -2.51
HTTP42858 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AL392103.1-201ENST00000447000 198 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AC015724.1-201ENST00000478577 156 ntBASIC-0.6□□□□□ -2.51
HTTP42858 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.6□□□□□ -2.51
HTTP42858 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
HTTP42858 MIR378D2-201ENST00000580636 98 ntBASIC-0.6□□□□□ -2.51
HTTP42858 FGF7P1-201ENST00000582820 288 ntBASIC-0.6□□□□□ -2.51
HTTP42858 MIR4499-201ENST00000584834 69 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AL606834.3-201ENST00000602615 496 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AC078795.3-201ENST00000602913 472 ntBASIC-0.6□□□□□ -2.51
HTTP42858 MIR6079-201ENST00000635807 62 ntBASIC-0.6□□□□□ -2.51
HTTP42858 U6.107-201ENST00000637108 79 ntBASIC-0.6□□□□□ -2.51
HTTP42858 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.61□□□□□ -2.51
HTTP42858 RNU6-534P-201ENST00000364877 106 ntBASIC-0.61□□□□□ -2.51
HTTP42858 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
HTTP42858 AL627311.1-201ENST00000431514 115 ntBASIC-0.61□□□□□ -2.51
HTTP42858 AL139824.2-201ENST00000458731 1095 ntBASIC-0.61□□□□□ -2.51
HTTP42858 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.61□□□□□ -2.51
HTTP42858 RNU6-180P-201ENST00000516697 61 ntBASIC-0.61□□□□□ -2.51
HTTP42858 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
HTTP42858 SNORA32.2-201ENST00000384049 122 ntBASIC-0.61□□□□□ -2.51
HTTP42858 RNU6-31P-201ENST00000384388 108 ntBASIC-0.61□□□□□ -2.51
HTTP42858 RNA5SP467-201ENST00000391274 118 ntBASIC-0.61□□□□□ -2.51
HTTP42858 RPS20P2-201ENST00000402520 389 ntBASIC-0.61□□□□□ -2.51
HTTP42858 FCF1P10-201ENST00000407590 479 ntBASIC-0.61□□□□□ -2.51
HTTP42858 DPRXP1-201ENST00000426312 460 ntBASIC-0.61□□□□□ -2.51
HTTP42858 AL353997.1-201ENST00000432936 108 ntBASIC-0.61□□□□□ -2.51
HTTP42858 VN1R10P-201ENST00000447106 875 ntBASIC-0.61□□□□□ -2.51
HTTP42858 ART2BP-201ENST00000453501 499 ntBASIC-0.61□□□□□ -2.51
HTTP42858 RPL37P6-201ENST00000460682 294 ntBASIC-0.61□□□□□ -2.51
HTTP42858 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.61□□□□□ -2.51
HTTP42858 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.61□□□□□ -2.51
HTTP42858 AC022022.2-201ENST00000602989 360 ntBASIC-0.61□□□□□ -2.51
HTTP42858 AL596327.1-201ENST00000603629 213 ntBASIC-0.61□□□□□ -2.51
HTTP42858 AC011374.2-201ENST00000607135 526 ntBASIC-0.61□□□□□ -2.51
HTTP42858 BX322639.1-202ENST00000423987 2213 ntBASIC-0.61□□□□□ -2.51
HTTP42858 MIR340-201ENST00000362125 95 ntBASIC-0.62□□□□□ -2.51
HTTP42858 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.62□□□□□ -2.51
HTTP42858 RNU6-878P-201ENST00000384578 110 ntBASIC-0.62□□□□□ -2.51
HTTP42858 MIR525-201ENST00000384978 85 ntBASIC-0.62□□□□□ -2.51
HTTP42858 MIR301A-201ENST00000385261 86 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AC010385.1-201ENST00000412374 256 ntBASIC-0.62□□□□□ -2.51
HTTP42858 MTATP6P27-201ENST00000416987 621 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AC093303.1-201ENST00000514549 295 ntBASIC-0.62□□□□□ -2.51
HTTP42858 SNORA31.10-201ENST00000516482 106 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AP003168.1-201ENST00000530091 307 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.62□□□□□ -2.51
HTTP42858 AL139022.2-201ENST00000606934 443 ntBASIC-0.62□□□□□ -2.51
HTTP42858 uc_338.28-201ENST00000612082 187 ntBASIC-0.62□□□□□ -2.51
HTTP42858 RNU6-655P-201ENST00000362858 107 ntBASIC-0.62□□□□□ -2.51
HTTP42858 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.62□□□□□ -2.51
HTTP42858 RNU4-56P-201ENST00000364700 142 ntBASIC-0.62□□□□□ -2.51
HTTP42858 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.62□□□□□ -2.51
HTTP42858 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.62□□□□□ -2.51
HTTP42858 MIR563-201ENST00000385080 79 ntBASIC-0.62□□□□□ -2.51
HTTP42858 MIR1302-7-201ENST00000408841 72 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
HTTP42858 SNRPEP8-201ENST00000442866 260 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.62□□□□□ -2.51
HTTP42858 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.62□□□□□ -2.51
HTTP42858 RPL21P9-201ENST00000556149 474 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AC090897.1-201ENST00000580909 226 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AL161798.1-201ENST00000604630 131 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AP003072.5-201ENST00000623872 773 ntBASIC-0.62□□□□□ -2.51
HTTP42858 MIR377-201ENST00000362145 69 ntBASIC-0.62□□□□□ -2.51
HTTP42858 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.62□□□□□ -2.51
HTTP42858 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.62□□□□□ -2.51
HTTP42858 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.62□□□□□ -2.51
HTTP42858 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.62□□□□□ -2.51
HTTP42858 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.62□□□□□ -2.51
HTTP42858 AC133485.4-201ENST00000561835 220 ntBASIC-0.62□□□□□ -2.51
HTTP42858 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.62□□□□□ -2.51
HTTP42858 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.63□□□□□ -2.51
HTTP42858 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.63□□□□□ -2.51
HTTP42858 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.63□□□□□ -2.51
HTTP42858 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.63□□□□□ -2.51
HTTP42858 MIR891A-201ENST00000401237 79 ntBASIC-0.63□□□□□ -2.51
HTTP42858 AL356583.2-201ENST00000426536 280 ntBASIC-0.63□□□□□ -2.51
HTTP42858 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.63□□□□□ -2.51
HTTP42858 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.63□□□□□ -2.51
HTTP42858 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.63□□□□□ -2.51
HTTP42858 RNU6-927P-201ENST00000516199 100 ntBASIC-0.63□□□□□ -2.51
HTTP42858 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.63□□□□□ -2.51
HTTP42858 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.63□□□□□ -2.51
HTTP42858 AC093519.1-201ENST00000566109 298 ntBASIC-0.63□□□□□ -2.51
HTTP42858 AC006441.5-201ENST00000612680 209 ntBASIC-0.63□□□□□ -2.51
HTTP42858 AC008250.2-201ENST00000615261 205 ntBASIC-0.63□□□□□ -2.51
HTTP42858 SNORA12.2-201ENST00000391040 156 ntBASIC-0.63□□□□□ -2.51
HTTP42858 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.63□□□□□ -2.51
HTTP42858 RNA5SP169-201ENST00000517268 117 ntBASIC-0.63□□□□□ -2.51
HTTP42858 MIR3152-201ENST00000579801 74 ntBASIC-0.63□□□□□ -2.51
HTTP42858 Z99497.2-201ENST00000603634 310 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms