Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL365203.2-201ENST00000423444 196 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 RNU7-167P-201ENST00000459160 62 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 BET1P1-201ENST00000482276 359 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 HMGB1P29-201ENST00000505659 499 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 AC067942.3-201ENST00000512025 362 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 RNU2-34P-201ENST00000516534 121 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 RNU1-142P-201ENST00000516682 145 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 MTND1P35-201ENST00000526739 508 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.99□□□□□ -2.25
BRCA1P38398 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.99□□□□□ -2.25
BRCA1P38398 Z99497.2-201ENST00000603634 310 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 CTHRC1P1-201ENST00000605383 469 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 AL603755.1-201ENST00000619504 163 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 AC006504.8-201ENST00000621046 635 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
BRCA1P38398 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
BRCA1P38398 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.99□□□□□ -2.25
BRCA1P38398 MTND4P32-201ENST00000437189 1237 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 AL356010.1-201ENST00000456364 102 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.99□□□□□ -2.25
BRCA1P38398 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.99□□□□□ -2.25
BRCA1P38398 AC068790.2-201ENST00000602601 557 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
BRCA1P38398 MIR340-201ENST00000362125 95 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 RNU6-553P-201ENST00000364047 96 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 Y_RNA.201-201ENST00000364052 96 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 Y_RNA.296-201ENST00000364930 108 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 RNU6-975P-201ENST00000384296 105 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 RNU6-784P-201ENST00000384330 106 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 AL358176.2-201ENST00000425769 204 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 AC007215.1-201ENST00000464893 276 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.98□□□□□ -2.25
BRCA1P38398 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.98□□□□□ -2.25
BRCA1P38398 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.98□□□□□ -2.25
BRCA1P38398 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.98□□□□□ -2.25
BRCA1P38398 AC119751.7-201ENST00000600494 245 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 AL162424.1-201ENST00000602325 221 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 AC068792.1-201ENST00000621354 417 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 MIR8063-201ENST00000621930 81 ntBASIC0.98□□□□□ -2.25
BRCA1P38398 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.98□□□□□ -2.25
BRCA1P38398 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.97□□□□□ -2.25
BRCA1P38398 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
BRCA1P38398 SNORD114-2-201ENST00000363953 78 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 RNU6-214P-201ENST00000384130 107 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 RNU6-950P-201ENST00000384651 107 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 MIR618-201ENST00000385287 98 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC245047.4-201ENST00000433189 144 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC027119.1-201ENST00000440877 241 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.97□□□□□ -2.25
BRCA1P38398 RNU7-63P-201ENST00000459054 62 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC091885.1-201ENST00000506658 268 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 RNU6-189P-201ENST00000516120 101 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC024995.1-201ENST00000523014 93 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 MRPS36P4-201ENST00000534436 298 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AP003034.1-201ENST00000534621 422 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 RRN3P3-201ENST00000549207 578 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC145350.1-201ENST00000567426 208 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC012414.6-201ENST00000568241 401 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC009229.3-201ENST00000608056 282 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AL354950.2-201ENST00000617939 290 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 MIR6835-201ENST00000621552 64 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC124864.2-201ENST00000624736 186 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 RNU6-1286P-201ENST00000383871 107 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.97□□□□□ -2.25
BRCA1P38398 RPL23AP75-201ENST00000491601 451 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AP001485.1-201ENST00000604799 199 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 AC068205.3-201ENST00000636385 468 ntBASIC0.97□□□□□ -2.25
BRCA1P38398 MTND4P5-201ENST00000435821 1374 ntBASIC0.96□□□□□ -2.25
BRCA1P38398 BX322639.1-202ENST00000423987 2213 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 RNU6-1240P-201ENST00000365155 104 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 RNU6-297P-201ENST00000384636 107 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 RNU6-1093P-201ENST00000391194 107 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 MIR1197-201ENST00000408818 88 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.96□□□□□ -2.26
BRCA1P38398 SNX2P2-201ENST00000424553 323 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 RNA5SP121-201ENST00000516537 101 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 SNORD60.2-201ENST00000516883 86 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.96□□□□□ -2.26
BRCA1P38398 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.96□□□□□ -2.26
BRCA1P38398 AC004223.4-201ENST00000612426 332 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 AC023510.2-201ENST00000622162 746 ntBASIC0.96□□□□□ -2.26
BRCA1P38398 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.96□□□□□ -2.26
BRCA1P38398 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
BRCA1P38398 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.95□□□□□ -2.26
BRCA1P38398 Y_RNA.381-201ENST00000365666 102 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 MIR1253-201ENST00000408273 105 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 MTCYBP8-201ENST00000422855 651 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.95□□□□□ -2.26
BRCA1P38398 AL022238.1-201ENST00000442557 355 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 NDUFB4P10-201ENST00000452541 359 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 RNU7-57P-201ENST00000459540 60 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.95□□□□□ -2.26
BRCA1P38398 RNA5SP437-201ENST00000517249 129 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AC010620.1-201ENST00000601088 1102 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AP001596.2-201ENST00000608410 312 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms