Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
HMGCLP35914 RNU6-245P-201ENST00000384020 107 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 SNORD14D-201ENST00000384390 87 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 MIR518A2-201ENST00000384966 87 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 MIR487A-201ENST00000385009 80 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 SNORA12.2-201ENST00000391040 156 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 SNORA75.4-201ENST00000391278 119 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 RPS20P15-201ENST00000412792 311 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 CYCSP49-201ENST00000420810 319 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 USMG5P1-201ENST00000425964 177 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGCLP35914 MTCO1P44-201ENST00000441935 243 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGCLP35914 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGCLP35914 RNU1-131P-201ENST00000458943 161 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 MTND4P17-201ENST00000470444 350 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGCLP35914 RNA5SP384-201ENST00000516615 116 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 Y_RNA.702-201ENST00000516843 96 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 RNU6-58P-201ENST00000517143 103 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AL590705.4-201ENST00000532209 134 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 APOOP3-201ENST00000536787 586 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 DEFB122-202ENST00000569013 197 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.68□□□□□ -2.14
HMGCLP35914 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGCLP35914 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
HMGCLP35914 AC104260.1-201ENST00000616660 539 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AC005562.2-201ENST00000618264 111 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 AL359757.2-201ENST00000624309 274 ntBASIC1.68□□□□□ -2.14
HMGCLP35914 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGCLP35914 Y_RNA.70-201ENST00000362886 110 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGCLP35914 Y_RNA.473-201ENST00000384333 102 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 MIR153-2-201ENST00000385225 87 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 RNU6-159P-201ENST00000391080 106 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 RNU1-139P-201ENST00000391307 165 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AL357139.1-201ENST00000407792 426 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AC123900.1-201ENST00000420390 96 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AC244636.1-201ENST00000421152 228 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGCLP35914 AC009237.7-201ENST00000447357 229 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 RNU7-152P-201ENST00000458982 64 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGCLP35914 MIR449C-201ENST00000516047 92 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 RNU6-344P-201ENST00000516635 111 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 RNU6-1198P-201ENST00000516904 67 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AC134698.4-201ENST00000523451 826 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AC090517.1-201ENST00000569307 266 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 MIR4273-201ENST00000582824 84 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AC005899.2-201ENST00000584353 90 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AL031274.2-201ENST00000599419 203 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGCLP35914 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 AC008873.1-201ENST00000625051 138 ntBASIC1.67□□□□□ -2.14
HMGCLP35914 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
HMGCLP35914 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGCLP35914 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGCLP35914 RNU4-42P-201ENST00000364738 142 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 SNORA18.2-201ENST00000383865 132 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGCLP35914 MTND2P29-201ENST00000438595 412 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCLP35914 ELOCP24-201ENST00000456370 334 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 RPL7P42-201ENST00000481005 679 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 AC097473.1-201ENST00000508142 408 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCLP35914 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCLP35914 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCLP35914 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCLP35914 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCLP35914 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCLP35914 AL669831.3-213ENST00000636676 183 ntBASIC1.66□□□□□ -2.14
HMGCLP35914 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGCLP35914 Y_RNA.319-201ENST00000365138 92 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 Y_RNA.387-201ENST00000383918 102 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 Y_RNA.405-201ENST00000383979 100 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 Y_RNA.451-201ENST00000384200 100 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 SNORD116-29-201ENST00000384516 83 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 Y_RNA.524-201ENST00000384564 100 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNU6-310P-201ENST00000384655 107 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 Y_RNA.561-201ENST00000384694 100 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 MIR32-201ENST00000384965 70 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNU6-1009P-201ENST00000390996 107 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 SNORA75.6-201ENST00000391318 127 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 MTCYBP4-201ENST00000401524 249 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNA5SP504-201ENST00000410676 117 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNA5SP450-201ENST00000411206 102 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGCLP35914 MTCO3P8-201ENST00000453691 755 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RPS23P5-201ENST00000495419 428 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNU7-175P-201ENST00000515915 61 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNU6-507P-201ENST00000516045 100 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNA5SP490-201ENST00000517141 136 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 SUB1P3-201ENST00000564581 315 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 MIR3169-201ENST00000578032 83 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms