Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC011494.1-201ENST00000596454 237 ntBASIC2.01□□□□□ -2.09
HOXD13P35453 AC069114.2-201ENST00000604699 304 ntBASIC2.01□□□□□ -2.09
HOXD13P35453 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXD13P35453 uc_338.5-201ENST00000611839 155 ntBASIC2.01□□□□□ -2.09
HOXD13P35453 PISRT1.1-201ENST00000616930 107 ntBASIC2.01□□□□□ -2.09
HOXD13P35453 AL133216.2-202ENST00000634512 349 ntBASIC2.01□□□□□ -2.09
HOXD13P35453 RNU6-1059P-201ENST00000363752 98 ntBASIC2□□□□□ -2.09
HOXD13P35453 SNORA16.1-201ENST00000364597 132 ntBASIC2□□□□□ -2.09
HOXD13P35453 Y_RNA.405-201ENST00000383979 100 ntBASIC2□□□□□ -2.09
HOXD13P35453 Y_RNA.451-201ENST00000384200 100 ntBASIC2□□□□□ -2.09
HOXD13P35453 RNU6-601P-201ENST00000384540 107 ntBASIC2□□□□□ -2.09
HOXD13P35453 Y_RNA.524-201ENST00000384564 100 ntBASIC2□□□□□ -2.09
HOXD13P35453 Y_RNA.561-201ENST00000384694 100 ntBASIC2□□□□□ -2.09
HOXD13P35453 FGF7P8-201ENST00000402994 292 ntBASIC2□□□□□ -2.09
HOXD13P35453 RNU6-1050P-201ENST00000410388 107 ntBASIC2□□□□□ -2.09
HOXD13P35453 HMGB1P18-201ENST00000438801 619 ntBASIC2□□□□□ -2.09
HOXD13P35453 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2□□□□□ -2.09
HOXD13P35453 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2□□□□□ -2.09
HOXD13P35453 AC026782.1-201ENST00000512952 449 ntBASIC2□□□□□ -2.09
HOXD13P35453 RNU6-307P-201ENST00000516743 106 ntBASIC2□□□□□ -2.09
HOXD13P35453 RNU1-117P-201ENST00000517041 158 ntBASIC2□□□□□ -2.09
HOXD13P35453 AC027288.2-201ENST00000553028 243 ntBASIC2□□□□□ -2.09
HOXD13P35453 AL121579.1-201ENST00000555129 305 ntBASIC2□□□□□ -2.09
HOXD13P35453 SUB1P4-201ENST00000566062 339 ntBASIC2□□□□□ -2.09
HOXD13P35453 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2□□□□□ -2.09
HOXD13P35453 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
HOXD13P35453 AL158827.2-201ENST00000602494 330 ntBASIC2□□□□□ -2.09
HOXD13P35453 AC008873.1-201ENST00000625051 138 ntBASIC2□□□□□ -2.09
HOXD13P35453 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
HOXD13P35453 AL691447.3-201ENST00000635020 330 ntBASIC2□□□□□ -2.09
HOXD13P35453 AC099654.5-201ENST00000636479 350 ntBASIC2□□□□□ -2.09
HOXD13P35453 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HOXD13P35453 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
HOXD13P35453 RNU6-845P-201ENST00000362578 103 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 SNORD48-201ENST00000364953 64 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 RNU6-842P-201ENST00000384269 107 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 RNU6-700P-201ENST00000391043 107 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 SNORA40.18-201ENST00000391200 128 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HOXD13P35453 RNA5SP100-201ENST00000410903 110 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 RNA5SP59-201ENST00000410922 110 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 AC107393.1-201ENST00000512403 346 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 AC011406.1-201ENST00000512440 370 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 RNU6-1041P-201ENST00000516254 102 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 GNAI2P1-201ENST00000541815 315 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 AC005899.2-201ENST00000584353 90 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 AC068205.3-201ENST00000636385 468 ntBASIC1.99□□□□□ -2.09
HOXD13P35453 MTND4P12-201ENST00000498999 1377 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 Y_RNA.166-201ENST00000363730 102 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 RNU6-873P-201ENST00000363833 107 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 RNU1-96P-201ENST00000364163 162 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 Y_RNA.279-201ENST00000364763 95 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 MT-TL1-201ENST00000386347 75 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 Y_RNA.594-201ENST00000410373 140 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 RPL21P111-201ENST00000418453 477 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 AC008134.1-201ENST00000420943 193 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 AC069257.2-201ENST00000441819 155 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 AC016717.1-201ENST00000448918 286 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 PRDX4P1-201ENST00000507189 574 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.98□□□□□ -2.09
HOXD13P35453 MIR4419B-201ENST00000577260 68 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 AC010900.2-201ENST00000604508 210 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
HOXD13P35453 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXD13P35453 AL356292.1-201ENST00000283110 373 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 RNU6-862P-201ENST00000362804 105 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 Y_RNA.339-201ENST00000365325 102 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 RNU6-793P-201ENST00000384233 104 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 MIR1253-201ENST00000408273 105 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 MIR1289-2-201ENST00000408360 111 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 AC007098.1-201ENST00000420122 367 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 AL445685.2-201ENST00000422551 342 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXD13P35453 CST2P1-201ENST00000425770 87 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXD13P35453 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 CBX3P8-201ENST00000532412 525 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXD13P35453 MIR6845-201ENST00000613182 61 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 AC005858.4-201ENST00000623191 700 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 AC022513.1-201ENST00000624512 117 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 snoZ196.1-201ENST00000625269 89 ntBASIC1.97□□□□□ -2.09
HOXD13P35453 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HOXD13P35453 Y_RNA.48-201ENST00000362710 103 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 U3.8-201ENST00000363675 217 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 Y_RNA.179-201ENST00000363844 90 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 RNU6-1019P-201ENST00000364424 107 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 SNORA67.2-201ENST00000384300 149 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 MIR520A-201ENST00000384862 85 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 MIR515-2-201ENST00000384883 83 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 376.2 ms