Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 SNORA60-201ENST00000362396 134 ntBASIC3.85□□□□□ -1.79
GPC1P35052 Y_RNA.85-201ENST00000363014 111 ntBASIC3.85□□□□□ -1.79
GPC1P35052 Y_RNA.796-201ENST00000364268 102 ntBASIC3.85□□□□□ -1.79
GPC1P35052 Y_RNA.799-201ENST00000364992 102 ntBASIC3.85□□□□□ -1.79
GPC1P35052 Y_RNA.328-201ENST00000365208 113 ntBASIC3.85□□□□□ -1.79
GPC1P35052 RNU6-117P-201ENST00000365415 107 ntBASIC3.85□□□□□ -1.79
GPC1P35052 Y_RNA.486-201ENST00000384398 107 ntBASIC3.85□□□□□ -1.79
GPC1P35052 SNORA51.10-201ENST00000384418 136 ntBASIC3.85□□□□□ -1.79
GPC1P35052 Y_RNA.549-201ENST00000384657 102 ntBASIC3.85□□□□□ -1.79
GPC1P35052 MIR29B2-201ENST00000385055 81 ntBASIC3.85□□□□□ -1.79
GPC1P35052 SNORA3C-201ENST00000408792 125 ntBASIC3.85□□□□□ -1.79
GPC1P35052 AC002075.2-201ENST00000425207 252 ntBASIC3.85□□□□□ -1.79
GPC1P35052 HMGN2P16-201ENST00000456802 261 ntBASIC3.85□□□□□ -1.79
GPC1P35052 RN7SL385P-201ENST00000468873 276 ntBASIC3.85□□□□□ -1.79
GPC1P35052 RPL32P34-201ENST00000486380 400 ntBASIC3.85□□□□□ -1.79
GPC1P35052 RN7SL604P-201ENST00000492589 296 ntBASIC3.85□□□□□ -1.79
GPC1P35052 OR9P1P-201ENST00000496431 281 ntBASIC3.85□□□□□ -1.79
GPC1P35052 ATP5EP1-201ENST00000510257 156 ntBASIC3.85□□□□□ -1.79
GPC1P35052 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
GPC1P35052 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.85□□□□□ -1.79
GPC1P35052 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
GPC1P35052 MIR4284-201ENST00000578924 81 ntBASIC3.85□□□□□ -1.79
GPC1P35052 AC110741.2-201ENST00000605278 268 ntBASIC3.85□□□□□ -1.79
GPC1P35052 AL591424.2-201ENST00000617023 128 ntBASIC3.85□□□□□ -1.79
GPC1P35052 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.85□□□□□ -1.79
GPC1P35052 MIR3653-201ENST00000625572 110 ntBASIC3.85□□□□□ -1.79
GPC1P35052 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GPC1P35052 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.85□□□□□ -1.79
GPC1P35052 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
GPC1P35052 MAPK10-373ENST00000641983 6772 ntBASIC3.85□□□□□ -1.79
GPC1P35052 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.85□□□□□ -1.79
GPC1P35052 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.85□□□□□ -1.79
GPC1P35052 UBE3AP2-201ENST00000429033 2259 ntBASIC3.84□□□□□ -1.79
GPC1P35052 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GPC1P35052 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.84□□□□□ -1.79
GPC1P35052 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.84□□□□□ -1.79
GPC1P35052 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.84□□□□□ -1.79
GPC1P35052 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
GPC1P35052 MIR1251-201ENST00000408552 70 ntBASIC3.84□□□□□ -1.79
GPC1P35052 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.84□□□□□ -1.79
GPC1P35052 AC097463.2-201ENST00000421074 142 ntBASIC3.84□□□□□ -1.79
GPC1P35052 EIF4EP4-201ENST00000424916 578 ntBASIC3.84□□□□□ -1.79
GPC1P35052 CALM2P4-201ENST00000430810 426 ntBASIC3.84□□□□□ -1.79
GPC1P35052 RPS4XP11-201ENST00000446897 772 ntBASIC3.84□□□□□ -1.79
GPC1P35052 RNA5SP246-201ENST00000458909 119 ntBASIC3.84□□□□□ -1.79
GPC1P35052 AC096725.1-201ENST00000514266 313 ntBASIC3.84□□□□□ -1.79
GPC1P35052 RNU6-762P-201ENST00000517107 102 ntBASIC3.84□□□□□ -1.79
GPC1P35052 AC007751.1-201ENST00000529260 376 ntBASIC3.84□□□□□ -1.79
GPC1P35052 MIR4662B-201ENST00000579498 81 ntBASIC3.84□□□□□ -1.79
GPC1P35052 AL365205.2-201ENST00000594586 68 ntBASIC3.84□□□□□ -1.79
GPC1P35052 JPX_2.1-201ENST00000614161 69 ntBASIC3.84□□□□□ -1.79
GPC1P35052 AC002064.3-201ENST00000623448 346 ntBASIC3.84□□□□□ -1.79
GPC1P35052 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.84□□□□□ -1.79
GPC1P35052 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.84□□□□□ -1.79
GPC1P35052 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.84□□□□□ -1.8
GPC1P35052 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
GPC1P35052 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
GPC1P35052 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.83□□□□□ -1.8
GPC1P35052 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GPC1P35052 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GPC1P35052 RNA5SP322-201ENST00000363617 119 ntBASIC3.83□□□□□ -1.8
GPC1P35052 RNU6-49P-201ENST00000384256 107 ntBASIC3.83□□□□□ -1.8
GPC1P35052 Y_RNA.558-201ENST00000384685 113 ntBASIC3.83□□□□□ -1.8
GPC1P35052 AL138878.1-201ENST00000405131 347 ntBASIC3.83□□□□□ -1.8
GPC1P35052 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.83□□□□□ -1.8
GPC1P35052 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.83□□□□□ -1.8
GPC1P35052 AC245102.2-201ENST00000448956 180 ntBASIC3.83□□□□□ -1.8
GPC1P35052 AC091167.1-201ENST00000492017 396 ntBASIC3.83□□□□□ -1.8
GPC1P35052 AC025647.1-201ENST00000517879 253 ntBASIC3.83□□□□□ -1.8
GPC1P35052 MIR3117-201ENST00000584034 78 ntBASIC3.83□□□□□ -1.8
GPC1P35052 MIR5684-201ENST00000585074 65 ntBASIC3.83□□□□□ -1.8
GPC1P35052 uc_338.14-201ENST00000613162 166 ntBASIC3.83□□□□□ -1.8
GPC1P35052 MIR8059-201ENST00000620427 81 ntBASIC3.83□□□□□ -1.8
GPC1P35052 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GPC1P35052 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GPC1P35052 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GPC1P35052 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GPC1P35052 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GPC1P35052 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.83□□□□□ -1.8
GPC1P35052 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GPC1P35052 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
GPC1P35052 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
GPC1P35052 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC1P35052 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC1P35052 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
GPC1P35052 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC1P35052 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
GPC1P35052 RNU6-234P-201ENST00000365229 104 ntBASIC3.82□□□□□ -1.8
GPC1P35052 RNU6-418P-201ENST00000384035 107 ntBASIC3.82□□□□□ -1.8
GPC1P35052 RNU1-89P-201ENST00000384592 164 ntBASIC3.82□□□□□ -1.8
GPC1P35052 MIR570-201ENST00000384917 97 ntBASIC3.82□□□□□ -1.8
GPC1P35052 AC007064.1-201ENST00000412238 351 ntBASIC3.82□□□□□ -1.8
GPC1P35052 HMGN2P31-201ENST00000432430 273 ntBASIC3.82□□□□□ -1.8
GPC1P35052 RN7SL807P-201ENST00000470923 297 ntBASIC3.82□□□□□ -1.8
GPC1P35052 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
GPC1P35052 RN7SL271P-201ENST00000487601 295 ntBASIC3.82□□□□□ -1.8
GPC1P35052 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.82□□□□□ -1.8
GPC1P35052 RNU6-126P-201ENST00000516685 103 ntBASIC3.82□□□□□ -1.8
GPC1P35052 AC109329.2-201ENST00000519658 482 ntBASIC3.82□□□□□ -1.8
GPC1P35052 AC011604.1-201ENST00000545978 196 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms