Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 OR5AK4P-201ENST00000635912 903 ntBASIC-0.2□□□□□ -2.44
CKS2P33552 SNORA63.3-201ENST00000362682 132 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 RNA5SP517-201ENST00000364724 117 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 MIR558-201ENST00000384920 94 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 MIR32-201ENST00000384965 70 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 MTCYBP36-201ENST00000404146 440 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 MED13P1-201ENST00000428342 171 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.21□□□□□ -2.44
CKS2P33552 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.21□□□□□ -2.44
CKS2P33552 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.21□□□□□ -2.44
CKS2P33552 AC074133.1-201ENST00000515696 183 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 RNU7-12P-201ENST00000516030 62 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 SNORA25.12-201ENST00000516202 82 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 AP003049.1-201ENST00000529418 457 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.21□□□□□ -2.44
CKS2P33552 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.21□□□□□ -2.44
CKS2P33552 MIR4300-201ENST00000581016 96 ntBASIC-0.21□□□□□ -2.44
CKS2P33552 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.21□□□□□ -2.44
CKS2P33552 SNORA67.2-201ENST00000384300 149 ntBASIC-0.22□□□□□ -2.44
CKS2P33552 SNORA40.8-201ENST00000411034 126 ntBASIC-0.22□□□□□ -2.44
CKS2P33552 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.22□□□□□ -2.44
CKS2P33552 AC103996.1-201ENST00000555468 102 ntBASIC-0.22□□□□□ -2.44
CKS2P33552 AC007684.1-201ENST00000609671 477 ntBASIC-0.22□□□□□ -2.44
CKS2P33552 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.45
CKS2P33552 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 SNORD116.1-201ENST00000365628 92 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 RNU6-641P-201ENST00000384006 107 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 RNU6-387P-201ENST00000411331 105 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.23□□□□□ -2.45
CKS2P33552 RPS24P1-201ENST00000438550 371 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC-0.23□□□□□ -2.45
CKS2P33552 MTCO3P8-201ENST00000453691 755 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AC104136.1-201ENST00000512969 394 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.23□□□□□ -2.45
CKS2P33552 AC023932.2-201ENST00000603176 175 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AC112187.2-201ENST00000604345 283 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AC104408.1-201ENST00000605241 170 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AC013244.3-201ENST00000605614 388 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AC008873.1-201ENST00000625051 138 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 AC126544.2-201ENST00000625174 749 ntBASIC-0.23□□□□□ -2.45
CKS2P33552 MIR1-1-201ENST00000362147 71 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 SNORD113.3-201ENST00000364630 78 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 SNORD116-12-201ENST00000384468 92 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 SNORD71-201ENST00000411292 86 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.24□□□□□ -2.45
CKS2P33552 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.24□□□□□ -2.45
CKS2P33552 ELOCP24-201ENST00000456370 334 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 SNORA62.5-201ENST00000516634 120 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 RNU4-77P-201ENST00000516692 156 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.24□□□□□ -2.45
CKS2P33552 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.24□□□□□ -2.45
CKS2P33552 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
CKS2P33552 MIR3612-201ENST00000579753 87 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 AC091805.2-201ENST00000603848 235 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 AC112191.3-201ENST00000604371 277 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 RMST_2.1-201ENST00000617263 136 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 AC004808.1-201ENST00000627671 721 ntBASIC-0.24□□□□□ -2.45
CKS2P33552 MIRLET7C-201ENST00000362160 84 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 RNU6-369P-201ENST00000362515 102 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 SNORD114-5-201ENST00000362928 70 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 SNORD114-23-201ENST00000363536 72 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 RNU6-827P-201ENST00000365553 106 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 AC137499.1-201ENST00000427602 88 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.25□□□□□ -2.45
CKS2P33552 AL603825.1-201ENST00000438481 80 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.25□□□□□ -2.45
CKS2P33552 MTCO2P29-201ENST00000465212 189 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 AC104695.3-201ENST00000604052 296 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 MIR8070-201ENST00000616510 88 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 AL078596.1-201ENST00000624856 447 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 AL445984.1-201ENST00000637834 659 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 MIR371B-201ENST00000638082 66 ntBASIC-0.25□□□□□ -2.45
CKS2P33552 AC005592.1-201ENST00000566527 1640 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 SNORA25.9-201ENST00000365087 128 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 RNU6-116P-201ENST00000384042 109 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 SNORD83.1-201ENST00000411362 77 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 MTND1P20-201ENST00000430341 950 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 AL031274.1-201ENST00000450334 232 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.26□□□□□ -2.45
CKS2P33552 AC112693.2-201ENST00000556538 232 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.26□□□□□ -2.45
CKS2P33552 AL592221.1-201ENST00000605266 382 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.26□□□□□ -2.45
CKS2P33552 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CKS2P33552 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CKS2P33552 RNU6-715P-201ENST00000365204 103 ntBASIC-0.27□□□□□ -2.45
CKS2P33552 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.27□□□□□ -2.45
CKS2P33552 RNU1-139P-201ENST00000391307 165 ntBASIC-0.27□□□□□ -2.45
CKS2P33552 RPS26P42-201ENST00000413485 326 ntBASIC-0.27□□□□□ -2.45
CKS2P33552 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.27□□□□□ -2.45
CKS2P33552 AL596276.1-201ENST00000434465 418 ntBASIC-0.27□□□□□ -2.45
CKS2P33552 RPL22P17-201ENST00000438729 315 ntBASIC-0.27□□□□□ -2.45
CKS2P33552 HMGN2P26-201ENST00000463169 339 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms