Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC023043.2-201ENST00000589678 1026 ntBASIC0.94□□□□□ -2.26
HLA-DMAP28067 AC092954.2-201ENST00000609103 430 ntBASIC0.94□□□□□ -2.26
HLA-DMAP28067 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DMAP28067 AC073534.2-201ENST00000620377 381 ntBASIC0.94□□□□□ -2.26
HLA-DMAP28067 AC006001.4-201ENST00000622243 395 ntBASIC0.94□□□□□ -2.26
HLA-DMAP28067 AC005858.4-201ENST00000623191 700 ntBASIC0.94□□□□□ -2.26
HLA-DMAP28067 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HLA-DMAP28067 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
HLA-DMAP28067 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 RNU6-1305P-201ENST00000364353 104 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 Y_RNA.373-201ENST00000365600 103 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 RNU6-483P-201ENST00000384088 108 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 U8.10-201ENST00000384260 133 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 RNU6-784P-201ENST00000384330 106 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 MIR300-201ENST00000401138 83 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 RNA5SP504-201ENST00000410676 117 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 AC016909.1-201ENST00000415916 166 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 AL590632.1-201ENST00000424289 371 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 HMGN2P34-201ENST00000437647 269 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 NFU1P2-201ENST00000448700 469 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 U8.21-201ENST00000459536 136 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 AL163195.1-201ENST00000496941 348 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.93□□□□□ -2.26
HLA-DMAP28067 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 SNORD116-28-201ENST00000516123 91 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 RNU6-948P-201ENST00000516374 107 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 MTND1P35-201ENST00000526739 508 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 AC016256.1-201ENST00000547971 354 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 TPRKBP2-201ENST00000565969 475 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.93□□□□□ -2.26
HLA-DMAP28067 AC010525.2-201ENST00000590920 195 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 MIR8076-201ENST00000611401 83 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 AC097520.1-201ENST00000624435 385 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 SCARNA4-201ENST00000629045 128 ntBASIC0.93□□□□□ -2.26
HLA-DMAP28067 ZNF204P-201ENST00000416749 2397 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DMAP28067 Y_RNA.41-201ENST00000362646 102 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 RNU6-1085P-201ENST00000363576 107 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 RNU6-457P-201ENST00000363999 107 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 MIR764-201ENST00000390811 85 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 RNA5SP109-201ENST00000391010 116 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 EIF4E2P1-201ENST00000393781 255 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DMAP28067 AL356776.1-201ENST00000406574 447 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 RPS26P42-201ENST00000413485 326 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 RPL23AP36-201ENST00000413895 458 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DMAP28067 MTCO1P20-201ENST00000425366 358 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC009237.7-201ENST00000447357 229 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 MTND1P11-201ENST00000456661 876 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 RNU7-57P-201ENST00000459540 60 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC093852.1-201ENST00000503587 266 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC091885.1-201ENST00000506658 268 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 Y_RNA.693-201ENST00000516641 110 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DMAP28067 AK6P2-201ENST00000549020 471 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC026371.1-201ENST00000551867 419 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AL442163.3-201ENST00000554110 156 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AL512360.1-201ENST00000555346 234 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AC146944.4-201ENST00000602697 718 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AL512598.1-201ENST00000610158 273 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 AL359880.1-201ENST00000621879 266 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 U6.108-201ENST00000637764 58 ntBASIC0.92□□□□□ -2.26
HLA-DMAP28067 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HLA-DMAP28067 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HLA-DMAP28067 OR4G1P-203ENST00000641984 1631 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
HLA-DMAP28067 Y_RNA.38-201ENST00000362617 102 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 Y_RNA.231-201ENST00000364358 102 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 RNU6-214P-201ENST00000384130 107 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 RNU6-1235P-201ENST00000384559 107 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 RNU6-57P-201ENST00000411348 103 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC004965.1-201ENST00000413033 213 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC010154.1-201ENST00000425857 269 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 MTCO3P29-201ENST00000432119 779 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC009474.2-201ENST00000451383 136 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC079354.2-201ENST00000453523 154 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 RNU6-498P-201ENST00000459468 107 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC114982.1-201ENST00000469402 321 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC019235.1-201ENST00000503847 207 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 RNU1-117P-201ENST00000517041 158 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 MIR4421-201ENST00000578133 69 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC100830.2-201ENST00000581636 240 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC097065.2-201ENST00000608159 533 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AL133215.3-201ENST00000609801 448 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 AL353149.1-201ENST00000610667 244 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 1172.6 ms