Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RNA5SP364-201ENST00000516938 78 ntBASIC1.66□□□□□ -2.14
GDF1P27539 Y_RNA.718-201ENST00000517110 102 ntBASIC1.66□□□□□ -2.14
GDF1P27539 AL590705.4-201ENST00000532209 134 ntBASIC1.66□□□□□ -2.14
GDF1P27539 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.66□□□□□ -2.14
GDF1P27539 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
GDF1P27539 MIR3126-201ENST00000577443 74 ntBASIC1.66□□□□□ -2.14
GDF1P27539 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
GDF1P27539 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.66□□□□□ -2.14
GDF1P27539 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
GDF1P27539 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.66□□□□□ -2.14
GDF1P27539 RMST_6.1-201ENST00000611980 203 ntBASIC1.66□□□□□ -2.14
GDF1P27539 PISRT1.1-201ENST00000616930 107 ntBASIC1.66□□□□□ -2.14
GDF1P27539 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.66□□□□□ -2.14
GDF1P27539 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
GDF1P27539 AL008636.1-201ENST00000625038 1018 ntBASIC1.66□□□□□ -2.14
GDF1P27539 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.66□□□□□ -2.14
GDF1P27539 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
GDF1P27539 AC009487.4-201ENST00000624969 3585 ntBASIC1.65□□□□□ -2.14
GDF1P27539 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
GDF1P27539 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
GDF1P27539 ZNF702P-202ENST00000434269 1966 ntBASIC1.65□□□□□ -2.14
GDF1P27539 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
GDF1P27539 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
GDF1P27539 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
GDF1P27539 Y_RNA.67-201ENST00000362870 100 ntBASIC1.65□□□□□ -2.15
GDF1P27539 RNU6-1159P-201ENST00000362933 107 ntBASIC1.65□□□□□ -2.15
GDF1P27539 RNY1P16-201ENST00000363063 111 ntBASIC1.65□□□□□ -2.15
GDF1P27539 RNU6-890P-201ENST00000384121 107 ntBASIC1.65□□□□□ -2.15
GDF1P27539 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
GDF1P27539 RNY4P36-201ENST00000391116 96 ntBASIC1.65□□□□□ -2.15
GDF1P27539 SNORA75.6-201ENST00000391318 127 ntBASIC1.65□□□□□ -2.15
GDF1P27539 AL035666.1-201ENST00000446195 348 ntBASIC1.65□□□□□ -2.15
GDF1P27539 TOMM22P6-201ENST00000465035 409 ntBASIC1.65□□□□□ -2.15
GDF1P27539 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.65□□□□□ -2.15
GDF1P27539 AC090517.1-201ENST00000569307 266 ntBASIC1.65□□□□□ -2.15
GDF1P27539 MIR4299-201ENST00000577899 72 ntBASIC1.65□□□□□ -2.15
GDF1P27539 MIR4769-201ENST00000584126 77 ntBASIC1.65□□□□□ -2.15
GDF1P27539 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.65□□□□□ -2.15
GDF1P27539 AC137590.2-201ENST00000619709 240 ntBASIC1.65□□□□□ -2.15
GDF1P27539 AL359697.1-201ENST00000624879 587 ntBASIC1.65□□□□□ -2.15
GDF1P27539 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
GDF1P27539 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
GDF1P27539 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
GDF1P27539 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
GDF1P27539 MIR340-201ENST00000362125 95 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RNA5SP432-201ENST00000362480 116 ntBASIC1.64□□□□□ -2.15
GDF1P27539 Y_RNA.58-201ENST00000362807 102 ntBASIC1.64□□□□□ -2.15
GDF1P27539 Y_RNA.154-201ENST00000363624 102 ntBASIC1.64□□□□□ -2.15
GDF1P27539 SNORA16.1-201ENST00000364597 132 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RNY3P1-201ENST00000365085 102 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RNY3-201ENST00000365484 102 ntBASIC1.64□□□□□ -2.15
GDF1P27539 MIR153-2-201ENST00000385225 87 ntBASIC1.64□□□□□ -2.15
GDF1P27539 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
GDF1P27539 RNA5SP213-201ENST00000391031 106 ntBASIC1.64□□□□□ -2.15
GDF1P27539 MTCYBP4-201ENST00000401524 249 ntBASIC1.64□□□□□ -2.15
GDF1P27539 AF228730.4-201ENST00000421457 183 ntBASIC1.64□□□□□ -2.15
GDF1P27539 HMGN2P18-201ENST00000450680 270 ntBASIC1.64□□□□□ -2.15
GDF1P27539 MTCO3P8-201ENST00000453691 755 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RPL23AP3-201ENST00000453844 468 ntBASIC1.64□□□□□ -2.15
GDF1P27539 ELOCP24-201ENST00000456370 334 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RN7SKP210-201ENST00000459176 261 ntBASIC1.64□□□□□ -2.15
GDF1P27539 SNORD19B-201ENST00000459623 84 ntBASIC1.64□□□□□ -2.15
GDF1P27539 AC132942.1-201ENST00000486753 483 ntBASIC1.64□□□□□ -2.15
GDF1P27539 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
GDF1P27539 AC093259.1-201ENST00000509755 300 ntBASIC1.64□□□□□ -2.15
GDF1P27539 AC107393.1-201ENST00000512403 346 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RNU6-991P-201ENST00000516168 107 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RNA5SP137-201ENST00000516833 135 ntBASIC1.64□□□□□ -2.15
GDF1P27539 RNU6-58P-201ENST00000517143 103 ntBASIC1.64□□□□□ -2.15
GDF1P27539 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.64□□□□□ -2.15
GDF1P27539 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.64□□□□□ -2.15
GDF1P27539 MIR5690-201ENST00000583739 73 ntBASIC1.64□□□□□ -2.15
GDF1P27539 MIR4795-201ENST00000584182 89 ntBASIC1.64□□□□□ -2.15
GDF1P27539 C8orf59P2-201ENST00000603441 271 ntBASIC1.64□□□□□ -2.15
GDF1P27539 AL355802.3-201ENST00000607571 545 ntBASIC1.64□□□□□ -2.15
GDF1P27539 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
GDF1P27539 BX322639.1-202ENST00000423987 2213 ntBASIC1.64□□□□□ -2.15
GDF1P27539 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
GDF1P27539 RNA5SP276-201ENST00000362580 94 ntBASIC1.63□□□□□ -2.15
GDF1P27539 Y_RNA.319-201ENST00000365138 92 ntBASIC1.63□□□□□ -2.15
GDF1P27539 Y_RNA.384-201ENST00000383909 102 ntBASIC1.63□□□□□ -2.15
GDF1P27539 Y_RNA.509-201ENST00000384506 99 ntBASIC1.63□□□□□ -2.15
GDF1P27539 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.63□□□□□ -2.15
GDF1P27539 SUMO2P12-201ENST00000405924 140 ntBASIC1.63□□□□□ -2.15
GDF1P27539 CYCSP49-201ENST00000420810 319 ntBASIC1.63□□□□□ -2.15
GDF1P27539 AC096920.1-201ENST00000423991 241 ntBASIC1.63□□□□□ -2.15
GDF1P27539 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.63□□□□□ -2.15
GDF1P27539 AC004386.2-201ENST00000441858 148 ntBASIC1.63□□□□□ -2.15
GDF1P27539 HMGN2P23-201ENST00000456759 269 ntBASIC1.63□□□□□ -2.15
GDF1P27539 RPL30P15-201ENST00000457129 321 ntBASIC1.63□□□□□ -2.15
GDF1P27539 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.63□□□□□ -2.15
GDF1P27539 RNU7-152P-201ENST00000458982 64 ntBASIC1.63□□□□□ -2.15
GDF1P27539 Y_RNA.653-201ENST00000459091 95 ntBASIC1.63□□□□□ -2.15
GDF1P27539 AP000870.1-201ENST00000472927 406 ntBASIC1.63□□□□□ -2.15
GDF1P27539 RNU7-175P-201ENST00000515915 61 ntBASIC1.63□□□□□ -2.15
GDF1P27539 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
GDF1P27539 UBL5P4-201ENST00000562584 236 ntBASIC1.63□□□□□ -2.15
GDF1P27539 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.63□□□□□ -2.15
GDF1P27539 AC005899.2-201ENST00000584353 90 ntBASIC1.63□□□□□ -2.15
GDF1P27539 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms