Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RNY1P16-201ENST00000363063 111 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 Y_RNA.405-201ENST00000383979 100 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 Y_RNA.451-201ENST00000384200 100 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 Y_RNA.524-201ENST00000384564 100 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 SNORA8-201ENST00000384574 139 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 RNU6-310P-201ENST00000384655 107 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 Y_RNA.561-201ENST00000384694 100 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 MT-TD-201ENST00000387419 68 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 RNU6-159P-201ENST00000391080 106 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 RNU1-139P-201ENST00000391307 165 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 AL079342.1-201ENST00000401460 267 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 SNRPEP8-201ENST00000442866 260 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 MTCO3P8-201ENST00000453691 755 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 ELOCP24-201ENST00000456370 334 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 RPS29P21-201ENST00000496272 170 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 SCARNA16.2-201ENST00000516520 172 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.97□□□□□ -2.09
PTPN3P26045 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN3P26045 MIR5006-201ENST00000583027 110 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 AC008873.1-201ENST00000625051 138 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
PTPN3P26045 AC245060.5-201ENST00000610778 3293 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 RNU1-62P-201ENST00000362599 164 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 RNU6-23P-201ENST00000363283 107 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 RNU6-280P-201ENST00000364145 104 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 Y_RNA.384-201ENST00000383909 102 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 MIR487A-201ENST00000385009 80 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PTPN3P26045 RNU6-700P-201ENST00000391043 107 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 RNU2-20P-201ENST00000410425 191 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 Y_RNA.646-201ENST00000410980 101 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 AC004866.1-201ENST00000411748 78 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 MTCO3P29-201ENST00000432119 779 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.96□□□□□ -2.1
PTPN3P26045 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.96□□□□□ -2.1
PTPN3P26045 RNU7-152P-201ENST00000458982 64 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 RPL17P19-201ENST00000489069 552 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 Y_RNA.706-201ENST00000516933 99 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 SUB1P3-201ENST00000564581 315 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 FRG2DP-202ENST00000566967 323 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 AC133104.2-201ENST00000615272 193 ntBASIC1.96□□□□□ -2.1
PTPN3P26045 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
PTPN3P26045 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
PTPN3P26045 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
PTPN3P26045 ZNF204P-201ENST00000416749 2397 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.95□□□□□ -2.1
PTPN3P26045 MIR340-201ENST00000362125 95 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 Y_RNA.48-201ENST00000362710 103 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 SNORD116-29-201ENST00000384516 83 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 Y_RNA.529-201ENST00000384586 119 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNU6-331P-201ENST00000384724 107 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 MIR597-201ENST00000384968 97 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 MIR586-201ENST00000385035 97 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 MIR549A-201ENST00000385268 96 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNA5SP213-201ENST00000391031 106 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNY4P36-201ENST00000391116 96 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 MIR1283-1-201ENST00000408494 87 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PTPN3P26045 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN3P26045 MTND3P23-201ENST00000431980 347 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 AC007395.1-201ENST00000451333 677 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 Y_RNA.653-201ENST00000459091 95 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNU6-1114P-201ENST00000516022 107 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNU1-41P-201ENST00000516161 162 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNU1-48P-201ENST00000516400 162 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNU2-34P-201ENST00000516534 121 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 RNU6-1213P-201ENST00000517075 94 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN3P26045 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN3P26045 AL355375.2-201ENST00000574825 175 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.95□□□□□ -2.1
PTPN3P26045 AL355802.3-201ENST00000607571 545 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 LINC02555-201ENST00000563933 1951 ntBASIC1.95□□□□□ -2.1
PTPN3P26045 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PTPN3P26045 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
PTPN3P26045 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.94□□□□□ -2.1
PTPN3P26045 Y_RNA.132-201ENST00000363421 102 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 SNORA67.2-201ENST00000384300 149 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 RNU6-541P-201ENST00000384709 110 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 MIR10B-201ENST00000385011 110 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 MIR190B-201ENST00000401119 79 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 AC019129.1-201ENST00000403786 261 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 MTCO1P44-201ENST00000441935 243 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 AL357134.1-201ENST00000445848 426 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 AP000870.1-201ENST00000472927 406 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 RN7SL429P-201ENST00000479090 223 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 RN7SL489P-201ENST00000486185 223 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 RN7SL327P-201ENST00000488659 223 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 MTND3P22-201ENST00000510932 243 ntBASIC1.94□□□□□ -2.1
PTPN3P26045 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.94□□□□□ -2.1
PTPN3P26045 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.94□□□□□ -2.1
PTPN3P26045 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.94□□□□□ -2.1
PTPN3P26045 RN7SL853P-201ENST00000617250 223 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms