Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AF228730.4-201ENST00000421457 183 ntBASIC1.98□□□□□ -2.09
CDH3P22223 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH3P22223 AC096920.1-201ENST00000423991 241 ntBASIC1.98□□□□□ -2.09
CDH3P22223 MTND3P23-201ENST00000431980 347 ntBASIC1.98□□□□□ -2.09
CDH3P22223 AC004386.2-201ENST00000441858 148 ntBASIC1.98□□□□□ -2.09
CDH3P22223 HMGN2P18-201ENST00000450680 270 ntBASIC1.98□□□□□ -2.09
CDH3P22223 MTCO3P8-201ENST00000453691 755 ntBASIC1.98□□□□□ -2.09
CDH3P22223 RNU7-152P-201ENST00000458982 64 ntBASIC1.98□□□□□ -2.09
CDH3P22223 AP000870.1-201ENST00000472927 406 ntBASIC1.98□□□□□ -2.09
CDH3P22223 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
CDH3P22223 RPL17P19-201ENST00000489069 552 ntBASIC1.98□□□□□ -2.09
CDH3P22223 RNU5F-4P-201ENST00000516581 114 ntBASIC1.98□□□□□ -2.09
CDH3P22223 RNA5SP490-201ENST00000517141 136 ntBASIC1.98□□□□□ -2.09
CDH3P22223 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH3P22223 AC026470.2-201ENST00000561492 181 ntBASIC1.98□□□□□ -2.09
CDH3P22223 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH3P22223 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CDH3P22223 7SK.7-201ENST00000603504 247 ntBASIC1.98□□□□□ -2.09
CDH3P22223 SNRPGP17-201ENST00000603780 214 ntBASIC1.98□□□□□ -2.09
CDH3P22223 AC100812.1-201ENST00000607622 580 ntBASIC1.98□□□□□ -2.09
CDH3P22223 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
CDH3P22223 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
CDH3P22223 RNU6-222P-201ENST00000362438 107 ntBASIC1.97□□□□□ -2.09
CDH3P22223 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
CDH3P22223 Y_RNA.509-201ENST00000384506 99 ntBASIC1.97□□□□□ -2.09
CDH3P22223 AL445646.1-201ENST00000431784 216 ntBASIC1.97□□□□□ -2.09
CDH3P22223 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH3P22223 AL445305.1-201ENST00000432577 575 ntBASIC1.97□□□□□ -2.09
CDH3P22223 RPL23AP50-201ENST00000434149 455 ntBASIC1.97□□□□□ -2.09
CDH3P22223 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH3P22223 AL137159.1-201ENST00000452808 512 ntBASIC1.97□□□□□ -2.09
CDH3P22223 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
CDH3P22223 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH3P22223 AC022493.2-201ENST00000506122 481 ntBASIC1.97□□□□□ -2.09
CDH3P22223 RNU2-44P-201ENST00000516795 194 ntBASIC1.97□□□□□ -2.09
CDH3P22223 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH3P22223 UBL5P4-201ENST00000562584 236 ntBASIC1.97□□□□□ -2.09
CDH3P22223 RPL17P51-201ENST00000605218 238 ntBASIC1.97□□□□□ -2.09
CDH3P22223 TCL6_2.1-201ENST00000615162 119 ntBASIC1.97□□□□□ -2.09
CDH3P22223 AC084781.2-201ENST00000615568 161 ntBASIC1.97□□□□□ -2.09
CDH3P22223 Y_RNA.106-201ENST00000363189 100 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RNU6-99P-201ENST00000364721 107 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RNU6-700P-201ENST00000391043 107 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RNU6-159P-201ENST00000391080 106 ntBASIC1.96□□□□□ -2.1
CDH3P22223 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
CDH3P22223 AL357139.1-201ENST00000407792 426 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
CDH3P22223 SRIP3-201ENST00000413200 219 ntBASIC1.96□□□□□ -2.1
CDH3P22223 MTCO2P27-201ENST00000420740 428 ntBASIC1.96□□□□□ -2.1
CDH3P22223 MTCYBP10-201ENST00000424905 650 ntBASIC1.96□□□□□ -2.1
CDH3P22223 HMGN2P3-201ENST00000433603 273 ntBASIC1.96□□□□□ -2.1
CDH3P22223 HMGN2P5-201ENST00000436882 273 ntBASIC1.96□□□□□ -2.1
CDH3P22223 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH3P22223 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RNU7-14P-201ENST00000459331 62 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RPS23P5-201ENST00000495419 428 ntBASIC1.96□□□□□ -2.1
CDH3P22223 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.96□□□□□ -2.1
CDH3P22223 RNU6-470P-201ENST00000515954 104 ntBASIC1.96□□□□□ -2.1
CDH3P22223 Y_RNA.675-201ENST00000516389 149 ntBASIC1.96□□□□□ -2.1
CDH3P22223 Y_RNA.706-201ENST00000516933 99 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RNA5SP54-201ENST00000516951 92 ntBASIC1.96□□□□□ -2.1
CDH3P22223 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH3P22223 AC004584.2-201ENST00000570407 410 ntBASIC1.96□□□□□ -2.1
CDH3P22223 AC026271.5-201ENST00000577873 130 ntBASIC1.96□□□□□ -2.1
CDH3P22223 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH3P22223 AC104985.2-201ENST00000620598 500 ntBASIC1.96□□□□□ -2.1
CDH3P22223 AC092881.1-201ENST00000638218 2733 ntBASIC1.96□□□□□ -2.1
CDH3P22223 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
CDH3P22223 RNU6-137P-201ENST00000363680 108 ntBASIC1.95□□□□□ -2.1
CDH3P22223 RNU6-873P-201ENST00000363833 107 ntBASIC1.95□□□□□ -2.1
CDH3P22223 Y_RNA.332-201ENST00000365271 113 ntBASIC1.95□□□□□ -2.1
CDH3P22223 MIR10B-201ENST00000385011 110 ntBASIC1.95□□□□□ -2.1
CDH3P22223 MIR559-201ENST00000385188 96 ntBASIC1.95□□□□□ -2.1
CDH3P22223 MIR190B-201ENST00000401119 79 ntBASIC1.95□□□□□ -2.1
CDH3P22223 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDH3P22223 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH3P22223 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH3P22223 AC009237.7-201ENST00000447357 229 ntBASIC1.95□□□□□ -2.1
CDH3P22223 HMGB3P17-201ENST00000504195 649 ntBASIC1.95□□□□□ -2.1
CDH3P22223 SUB1P3-201ENST00000564581 315 ntBASIC1.95□□□□□ -2.1
CDH3P22223 MIR5006-201ENST00000583027 110 ntBASIC1.95□□□□□ -2.1
CDH3P22223 SNRPGP20-201ENST00000604477 205 ntBASIC1.95□□□□□ -2.1
CDH3P22223 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH3P22223 AC133104.2-201ENST00000615272 193 ntBASIC1.95□□□□□ -2.1
CDH3P22223 AL359314.1-201ENST00000616913 261 ntBASIC1.95□□□□□ -2.1
CDH3P22223 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CDH3P22223 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CDH3P22223 MIR340-201ENST00000362125 95 ntBASIC1.94□□□□□ -2.1
CDH3P22223 SNORD31B-201ENST00000364977 69 ntBASIC1.94□□□□□ -2.1
CDH3P22223 SNORD14D-201ENST00000384390 87 ntBASIC1.94□□□□□ -2.1
CDH3P22223 RNU6-541P-201ENST00000384709 110 ntBASIC1.94□□□□□ -2.1
CDH3P22223 MIR504-201ENST00000385065 83 ntBASIC1.94□□□□□ -2.1
CDH3P22223 RNA5SP213-201ENST00000391031 106 ntBASIC1.94□□□□□ -2.1
CDH3P22223 RNU1-139P-201ENST00000391307 165 ntBASIC1.94□□□□□ -2.1
CDH3P22223 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
CDH3P22223 AC092423.1-201ENST00000430165 186 ntBASIC1.94□□□□□ -2.1
CDH3P22223 AC236972.2-201ENST00000434979 310 ntBASIC1.94□□□□□ -2.1
CDH3P22223 AC016925.1-201ENST00000458303 298 ntBASIC1.94□□□□□ -2.1
CDH3P22223 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH3P22223 RNU6-1198P-201ENST00000516904 67 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms