Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 AL590705.4-201ENST00000532209 134 ntBASIC0.72□□□□□ -2.29
SRMP19623 AL137100.2-201ENST00000555786 315 ntBASIC0.72□□□□□ -2.29
SRMP19623 AL357312.1-201ENST00000603879 298 ntBASIC0.72□□□□□ -2.29
SRMP19623 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
SRMP19623 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
SRMP19623 AL390237.1-201ENST00000404226 1415 ntBASIC0.72□□□□□ -2.29
SRMP19623 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SRMP19623 Y_RNA.4-201ENST00000362333 112 ntBASIC0.71□□□□□ -2.3
SRMP19623 RNU6-553P-201ENST00000364047 96 ntBASIC0.71□□□□□ -2.3
SRMP19623 SNORD73A-201ENST00000386062 65 ntBASIC0.71□□□□□ -2.3
SRMP19623 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
SRMP19623 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
SRMP19623 COX6CP14-201ENST00000469580 174 ntBASIC0.71□□□□□ -2.3
SRMP19623 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.71□□□□□ -2.3
SRMP19623 HIF1AP1-201ENST00000553642 175 ntBASIC0.71□□□□□ -2.3
SRMP19623 AC080078.3-201ENST00000605407 463 ntBASIC0.71□□□□□ -2.3
SRMP19623 SNORA28-201ENST00000606769 126 ntBASIC0.71□□□□□ -2.3
SRMP19623 AC072046.2-201ENST00000618366 268 ntBASIC0.71□□□□□ -2.3
SRMP19623 AC106754.2-201ENST00000623006 233 ntBASIC0.71□□□□□ -2.3
SRMP19623 U6.108-201ENST00000637764 58 ntBASIC0.71□□□□□ -2.3
SRMP19623 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SRMP19623 Y_RNA.164-201ENST00000363709 102 ntBASIC0.7□□□□□ -2.3
SRMP19623 RNU6-53P-201ENST00000365367 106 ntBASIC0.7□□□□□ -2.3
SRMP19623 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
SRMP19623 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
SRMP19623 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
SRMP19623 AL451046.2-201ENST00000403074 277 ntBASIC0.7□□□□□ -2.3
SRMP19623 AC004866.1-201ENST00000411748 78 ntBASIC0.7□□□□□ -2.3
SRMP19623 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
SRMP19623 AC016909.1-201ENST00000415916 166 ntBASIC0.7□□□□□ -2.3
SRMP19623 MTCO2P34-201ENST00000421994 607 ntBASIC0.7□□□□□ -2.3
SRMP19623 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.7□□□□□ -2.3
SRMP19623 CETN4P-201ENST00000432407 469 ntBASIC0.7□□□□□ -2.3
SRMP19623 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.7□□□□□ -2.3
SRMP19623 HMGB1P29-201ENST00000505659 499 ntBASIC0.7□□□□□ -2.3
SRMP19623 RPL39P5-202ENST00000512505 151 ntBASIC0.7□□□□□ -2.3
SRMP19623 SNORA14.1-201ENST00000516113 141 ntBASIC0.7□□□□□ -2.3
SRMP19623 AC087854.1-201ENST00000519706 414 ntBASIC0.7□□□□□ -2.3
SRMP19623 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SRMP19623 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SRMP19623 AC090049.2-201ENST00000550377 109 ntBASIC0.7□□□□□ -2.3
SRMP19623 SUB1P2-201ENST00000556401 297 ntBASIC0.7□□□□□ -2.3
SRMP19623 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
SRMP19623 OR4G1P-203ENST00000641984 1631 ntBASIC0.7□□□□□ -2.3
SRMP19623 AC008163.1-202ENST00000636004 2889 ntBASIC0.7□□□□□ -2.3
SRMP19623 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SRMP19623 FGF7P2-201ENST00000332473 296 ntBASIC0.69□□□□□ -2.3
SRMP19623 RNU6-199P-201ENST00000362954 107 ntBASIC0.69□□□□□ -2.3
SRMP19623 Y_RNA.123-201ENST00000363338 102 ntBASIC0.69□□□□□ -2.3
SRMP19623 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.69□□□□□ -2.3
SRMP19623 SNORA67.2-201ENST00000384300 149 ntBASIC0.69□□□□□ -2.3
SRMP19623 RNU6-297P-201ENST00000384636 107 ntBASIC0.69□□□□□ -2.3
SRMP19623 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
SRMP19623 SNRPGP9-201ENST00000456025 225 ntBASIC0.69□□□□□ -2.3
SRMP19623 RNU7-125P-201ENST00000458760 62 ntBASIC0.69□□□□□ -2.3
SRMP19623 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.69□□□□□ -2.3
SRMP19623 RNU6-947P-201ENST00000516264 106 ntBASIC0.69□□□□□ -2.3
SRMP19623 RNU7-99P-201ENST00000516271 62 ntBASIC0.69□□□□□ -2.3
SRMP19623 CBX3P8-201ENST00000532412 525 ntBASIC0.69□□□□□ -2.3
SRMP19623 MRPS36P4-201ENST00000534436 298 ntBASIC0.69□□□□□ -2.3
SRMP19623 APOOP3-201ENST00000536787 586 ntBASIC0.69□□□□□ -2.3
SRMP19623 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.69□□□□□ -2.3
SRMP19623 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.69□□□□□ -2.3
SRMP19623 AC009094.1-201ENST00000564443 426 ntBASIC0.69□□□□□ -2.3
SRMP19623 AC234772.3-201ENST00000602277 528 ntBASIC0.69□□□□□ -2.3
SRMP19623 uc_338.34-201ENST00000617467 174 ntBASIC0.69□□□□□ -2.3
SRMP19623 AC005609.4-201ENST00000625071 447 ntBASIC0.69□□□□□ -2.3
SRMP19623 SCARNA4-201ENST00000629045 128 ntBASIC0.69□□□□□ -2.3
SRMP19623 RNU6-1266P-201ENST00000362794 105 ntBASIC0.68□□□□□ -2.3
SRMP19623 AF228730.1-201ENST00000397972 663 ntBASIC0.68□□□□□ -2.3
SRMP19623 RNU6-1186P-201ENST00000410429 97 ntBASIC0.68□□□□□ -2.3
SRMP19623 MTATP6P18-201ENST00000417994 673 ntBASIC0.68□□□□□ -2.3
SRMP19623 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.68□□□□□ -2.3
SRMP19623 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.68□□□□□ -2.3
SRMP19623 AC244505.5-201ENST00000443639 207 ntBASIC0.68□□□□□ -2.3
SRMP19623 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.68□□□□□ -2.3
SRMP19623 BET1P1-201ENST00000482276 359 ntBASIC0.68□□□□□ -2.3
SRMP19623 RNA5SP54-201ENST00000516951 92 ntBASIC0.68□□□□□ -2.3
SRMP19623 AC008015.1-201ENST00000555505 465 ntBASIC0.68□□□□□ -2.3
SRMP19623 AC022432.1-201ENST00000595739 310 ntBASIC0.68□□□□□ -2.3
SRMP19623 SNORD11B-201ENST00000607707 90 ntBASIC0.68□□□□□ -2.3
SRMP19623 AC139792.3-201ENST00000623525 224 ntBASIC0.68□□□□□ -2.3
SRMP19623 RNY3P10-201ENST00000384764 102 ntBASIC0.67□□□□□ -2.3
SRMP19623 RNA5SP219-201ENST00000390940 113 ntBASIC0.67□□□□□ -2.3
SRMP19623 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
SRMP19623 RNU6-248P-201ENST00000410720 107 ntBASIC0.67□□□□□ -2.3
SRMP19623 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.67□□□□□ -2.3
SRMP19623 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.67□□□□□ -2.3
SRMP19623 RNU7-180P-201ENST00000459240 63 ntBASIC0.67□□□□□ -2.3
SRMP19623 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.67□□□□□ -2.3
SRMP19623 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.67□□□□□ -2.3
SRMP19623 MTATP6P3-201ENST00000581686 676 ntBASIC0.67□□□□□ -2.3
SRMP19623 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
SRMP19623 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
SRMP19623 RNU6-1080P-201ENST00000383982 107 ntBASIC0.66□□□□□ -2.3
SRMP19623 RNU6-245P-201ENST00000384020 107 ntBASIC0.66□□□□□ -2.3
SRMP19623 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
SRMP19623 MIR499A-201ENST00000384903 122 ntBASIC0.66□□□□□ -2.3
SRMP19623 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
SRMP19623 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms