Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 Y_RNA.686-201ENST00000516548 134 ntBASIC3.8□□□□□ -1.8
PTPRAP18433 MIR2682-201ENST00000580305 110 ntBASIC3.8□□□□□ -1.8
PTPRAP18433 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPRAP18433 AL391903.3-201ENST00000612158 163 ntBASIC3.8□□□□□ -1.8
PTPRAP18433 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PTPRAP18433 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPRAP18433 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTPRAP18433 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPRAP18433 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPRAP18433 AC010889.1-201ENST00000566193 2666 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 AC007496.3-201ENST00000624987 3443 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRAP18433 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRAP18433 U3.8-201ENST00000363675 217 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 MIR3074-201ENST00000384885 81 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 MIR15B-201ENST00000385045 98 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 AC126124.2-201ENST00000413542 321 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 AL365496.1-201ENST00000426885 215 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 RPS3P1-201ENST00000456781 192 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 AP000867.2-201ENST00000532468 320 ntBASIC3.79□□□□□ -1.8
PTPRAP18433 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPRAP18433 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PTPRAP18433 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRAP18433 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRAP18433 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPRAP18433 AC110774.1-201ENST00000623567 2018 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PTPRAP18433 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPRAP18433 snoU2_19.1-201ENST00000362361 80 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 RNU6-1210P-201ENST00000363775 107 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 Y_RNA.229-201ENST00000364347 113 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 RNU6-1325P-201ENST00000364905 105 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 RNU6-643P-201ENST00000384018 107 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 RNU6-80P-201ENST00000384195 107 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 MIR548B-201ENST00000385247 97 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 AC107083.1-201ENST00000439643 279 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 AC010099.1-201ENST00000455434 375 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 RPL23AP67-201ENST00000465341 474 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 AC008885.1-201ENST00000514930 301 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 RNU6-561P-201ENST00000516222 102 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 HSPE1P18-201ENST00000517602 280 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 AC025754.2-201ENST00000606491 432 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPRAP18433 ZNF702P-202ENST00000434269 1966 ntBASIC3.78□□□□□ -1.8
PTPRAP18433 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPRAP18433 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
PTPRAP18433 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRAP18433 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRAP18433 RNU6-655P-201ENST00000362858 107 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 SNORA7.4-201ENST00000384249 137 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 RNU6-198P-201ENST00000384258 104 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 RNU6-460P-201ENST00000391158 108 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 SNORA12-201ENST00000391162 147 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 AL606845.1-201ENST00000404881 255 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRAP18433 RPL23AP58-201ENST00000440453 469 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 AC025750.2-201ENST00000442609 450 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRAP18433 RPS4XP2-201ENST00000458402 793 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPRAP18433 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPRAP18433 UBL5P2-201ENST00000583788 219 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 AC011603.4-201ENST00000611325 277 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 uc_338.1-201ENST00000612113 180 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 TUG1_4.1-201ENST00000619464 181 ntBASIC3.77□□□□□ -1.81
PTPRAP18433 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRAP18433 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRAP18433 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPRAP18433 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRAP18433 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PTPRAP18433 AC017071.1-201ENST00000564407 2204 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PTPRAP18433 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRAP18433 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PTPRAP18433 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PTPRAP18433 AL136164.4-201ENST00000625013 2135 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRAP18433 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRAP18433 RNU6-153P-201ENST00000364422 104 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 RNA5SP229-201ENST00000410809 99 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 AC092991.1-201ENST00000477176 376 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPRAP18433 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPRAP18433 MIR4724-201ENST00000579485 89 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 uc_338.32-201ENST00000615087 172 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 AL137790.1-201ENST00000634283 177 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PTPRAP18433 AL391516.1-201ENST00000554380 2449 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRAP18433 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRAP18433 AC069528.2-201ENST00000624849 1991 ntBASIC3.76□□□□□ -1.81
PTPRAP18433 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRAP18433 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPRAP18433 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRAP18433 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRAP18433 MIR367-201ENST00000362299 68 ntBASIC3.75□□□□□ -1.81
PTPRAP18433 RNU6-1305P-201ENST00000364353 104 ntBASIC3.75□□□□□ -1.81
PTPRAP18433 RNU6-768P-201ENST00000384683 107 ntBASIC3.75□□□□□ -1.81
PTPRAP18433 RNU6-383P-201ENST00000410864 94 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 239.9 ms