Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
ERCC2P18074 SNORD5.1-201ENST00000458800 75 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 AC114982.1-201ENST00000469402 321 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 RNU2-34P-201ENST00000516534 121 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 RNU6-344P-201ENST00000516635 111 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 SNORA31.17-201ENST00000516953 127 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 RNU1-117P-201ENST00000517041 158 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.84□□□□□ -2.11
ERCC2P18074 AC104984.5-201ENST00000586878 94 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 7SK.7-201ENST00000603504 247 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ERCC2P18074 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ERCC2P18074 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ERCC2P18074 ZNF299P-201ENST00000406845 1804 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 Y_RNA.48-201ENST00000362710 103 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-245P-201ENST00000384020 107 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-767P-201ENST00000384132 107 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-17P-201ENST00000384245 107 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-18P-201ENST00000384527 107 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-1235P-201ENST00000384559 107 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-541P-201ENST00000384709 110 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 MT-TL1-201ENST00000386347 75 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ERCC2P18074 MIR548K-201ENST00000408406 116 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RPL21P111-201ENST00000418453 477 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.83□□□□□ -2.12
ERCC2P18074 RNU6-498P-201ENST00000459468 107 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ERCC2P18074 AC011406.1-201ENST00000512440 370 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
ERCC2P18074 SNORA25.14-201ENST00000516481 132 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 RNA5SP384-201ENST00000516615 116 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
ERCC2P18074 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
ERCC2P18074 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
ERCC2P18074 RNU6-873P-201ENST00000363833 107 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 RNU6-595P-201ENST00000363944 107 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 Y_RNA.473-201ENST00000384333 102 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 AL117342.1-201ENST00000404861 406 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.82□□□□□ -2.12
ERCC2P18074 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.82□□□□□ -2.12
ERCC2P18074 RNU7-57P-201ENST00000459540 60 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 HMGB3P17-201ENST00000504195 649 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 RNU7-175P-201ENST00000515915 61 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 RNU7-30P-201ENST00000516835 62 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 AL590705.4-201ENST00000532209 134 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.82□□□□□ -2.12
ERCC2P18074 UBL5P4-201ENST00000562584 236 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
ERCC2P18074 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 AL078596.1-201ENST00000624856 447 ntBASIC1.82□□□□□ -2.12
ERCC2P18074 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ERCC2P18074 RNU1-96P-201ENST00000364163 162 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 Y_RNA.279-201ENST00000364763 95 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 Y_RNA.405-201ENST00000383979 100 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 Y_RNA.451-201ENST00000384200 100 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 Y_RNA.524-201ENST00000384564 100 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 Y_RNA.561-201ENST00000384694 100 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 MIR504-201ENST00000385065 83 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AL033519.2-201ENST00000403958 392 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 RNA5SP504-201ENST00000410676 117 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.81□□□□□ -2.12
ERCC2P18074 AC074085.1-201ENST00000413598 418 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 MTCO3P29-201ENST00000432119 779 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 RPS3AP52-201ENST00000435639 297 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AC074290.1-201ENST00000448883 135 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 RN7SKP210-201ENST00000459176 261 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.81□□□□□ -2.12
ERCC2P18074 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AC026782.1-201ENST00000512952 449 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AC046134.1-201ENST00000514454 666 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 CBX3P8-201ENST00000532412 525 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ERCC2P18074 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.81□□□□□ -2.12
ERCC2P18074 AC011494.1-201ENST00000596454 237 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AC018462.2-201ENST00000605375 395 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 SNORD11B-201ENST00000607707 90 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.81□□□□□ -2.12
ERCC2P18074 MIR6715A-201ENST00000615929 79 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AC126177.8-201ENST00000618339 1015 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 AC008873.1-201ENST00000625051 138 ntBASIC1.81□□□□□ -2.12
ERCC2P18074 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.81□□□□□ -2.12
ERCC2P18074 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
ERCC2P18074 RNU6-137P-201ENST00000363680 108 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 Y_RNA.184-201ENST00000363884 108 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 RNU6-159P-201ENST00000391080 106 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 RNU6-57P-201ENST00000411348 103 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.8□□□□□ -2.12
ERCC2P18074 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.8□□□□□ -2.12
ERCC2P18074 AC107399.1-201ENST00000451226 265 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 RPL31P58-201ENST00000469001 379 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 RNU6-1016P-201ENST00000516689 94 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 RNU6-295P-201ENST00000516901 104 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms