Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RPL30P11-203ENST00000598995 310 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN1P18031 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN1P18031 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN1P18031 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPN1P18031 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN1P18031 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.82-201ENST00000363000 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.92-201ENST00000363043 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.235-201ENST00000364412 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.270-201ENST00000364693 104 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.306-201ENST00000365015 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.312-201ENST00000365089 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.322-201ENST00000365151 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 RNU6-1289P-201ENST00000384431 106 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 SNORA46-201ENST00000384762 135 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 RN7SKP123-201ENST00000410732 291 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 EEF1A1P41-201ENST00000414667 207 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.650-201ENST00000459002 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 RPL31P41-201ENST00000477967 372 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 SNORD116-28-201ENST00000516123 91 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.777-201ENST00000516982 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 RNU1-117P-201ENST00000517041 158 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 CBX3P4-201ENST00000538909 354 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 EIF4BP1-201ENST00000554881 351 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 AC008739.2-201ENST00000597006 317 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.771-201ENST00000598668 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 AL365434.2-201ENST00000607979 234 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 Y_RNA.789-201ENST00000622480 102 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 AC091564.4-201ENST00000533934 2194 ntBASIC3.14□□□□□ -1.91
PTPN1P18031 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN1P18031 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN1P18031 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN1P18031 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN1P18031 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 RNU4-80P-201ENST00000363200 141 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 Y_RNA.111-201ENST00000363248 100 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 Y_RNA.150-201ENST00000363562 102 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 RNA5SP139-201ENST00000364340 117 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 SNORD87-201ENST00000364849 89 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 RNA5SP504-201ENST00000410676 117 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 RPS29P26-201ENST00000477483 171 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 RN7SL633P-201ENST00000488974 297 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 RNA5SP385-201ENST00000515947 110 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 AC024405.2-202ENST00000532731 184 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN1P18031 MIR3145-201ENST00000580727 82 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 AC006380.1-201ENST00000603598 186 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 RPL17P51-201ENST00000605218 238 ntBASIC3.13□□□□□ -1.91
PTPN1P18031 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN1P18031 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PTPN1P18031 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN1P18031 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PTPN1P18031 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN1P18031 RNU6-486P-201ENST00000363116 107 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 RNU6-662P-201ENST00000384253 104 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN1P18031 Y_RNA.638-201ENST00000459374 113 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 AC083906.5-201ENST00000503722 328 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 RNU6-191P-201ENST00000516295 94 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 DEFB117-201ENST00000602356 141 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 Z83818.1-201ENST00000603584 150 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
PTPN1P18031 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN1P18031 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN1P18031 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN1P18031 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PTPN1P18031 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPN1P18031 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTPN1P18031 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN1P18031 Y_RNA.180-201ENST00000363867 113 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 SNORD32B-201ENST00000364460 84 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 RNU6-851P-201ENST00000384565 107 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPN1P18031 AL139132.1-201ENST00000431587 344 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 SNORA59A-201ENST00000459326 152 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN1P18031 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPN1P18031 RNU2-12P-201ENST00000517216 168 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 SCARNA11.3-201ENST00000517276 130 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN1P18031 AP002392.1-201ENST00000537692 208 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN1P18031 AC011921.3-201ENST00000605540 361 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 AC006386.2-201ENST00000624491 75 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 AC012005.1-201ENST00000624575 75 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 AC090517.3-201ENST00000625170 141 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms