Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PDGFRAP16234 RNA5SP99-201ENST00000364020 114 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 SNORA67.2-201ENST00000384300 149 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 AC243428.1-201ENST00000421099 264 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 HMGN2P9-201ENST00000476875 229 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.81□□□□□ -2.12
PDGFRAP16234 FO393415.2-201ENST00000480085 343 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 AC010409.1-201ENST00000487382 476 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.81□□□□□ -2.12
PDGFRAP16234 RNU6-358P-201ENST00000516564 75 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 RNU6-58P-201ENST00000517143 103 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 MIR5094-201ENST00000578766 85 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.81□□□□□ -2.12
PDGFRAP16234 MIR4273-201ENST00000582824 84 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 AC060780.3-201ENST00000589464 80 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 7SK.7-201ENST00000603504 247 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 BNIP3P10-201ENST00000605360 577 ntBASIC1.81□□□□□ -2.12
PDGFRAP16234 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PDGFRAP16234 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PDGFRAP16234 Y_RNA.248-201ENST00000364501 109 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 RNU6-1235P-201ENST00000384559 107 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 AL627390.1-201ENST00000396055 340 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 AC099677.2-201ENST00000436385 175 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.8□□□□□ -2.12
PDGFRAP16234 SNORD5.1-201ENST00000458800 75 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 RNU6-498P-201ENST00000459468 107 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
PDGFRAP16234 AC027575.1-201ENST00000481064 460 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.8□□□□□ -2.12
PDGFRAP16234 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
PDGFRAP16234 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.8□□□□□ -2.12
PDGFRAP16234 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.8□□□□□ -2.12
PDGFRAP16234 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.8□□□□□ -2.12
PDGFRAP16234 MIR4790-201ENST00000577799 79 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 MIR6128-201ENST00000615528 109 ntBASIC1.8□□□□□ -2.12
PDGFRAP16234 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.8□□□□□ -2.12
PDGFRAP16234 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
PDGFRAP16234 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 RNU6-112P-201ENST00000363599 104 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 RNU4-42P-201ENST00000364738 142 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 Y_RNA.319-201ENST00000365138 92 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 RNU6-17P-201ENST00000384245 107 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 RNU6-18P-201ENST00000384527 107 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 AL356776.1-201ENST00000406574 447 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 AC060773.1-201ENST00000421698 310 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 USP9YP30-201ENST00000430729 455 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 HMGB1P18-201ENST00000438801 619 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 RPL30P10-201ENST00000488148 337 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 MTND5P5-201ENST00000503764 376 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 AC008834.1-201ENST00000511612 175 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 Y_RNA.682-201ENST00000516457 100 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.79□□□□□ -2.12
PDGFRAP16234 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 AC027288.2-201ENST00000553028 243 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 MIR4742-201ENST00000581069 85 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.79□□□□□ -2.12
PDGFRAP16234 AL353149.1-201ENST00000610667 244 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 AC008873.1-201ENST00000625051 138 ntBASIC1.79□□□□□ -2.12
PDGFRAP16234 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PDGFRAP16234 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
PDGFRAP16234 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
PDGFRAP16234 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PDGFRAP16234 AC245060.5-201ENST00000610778 3293 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 RNU6-862P-201ENST00000362804 105 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 RNU6-1305P-201ENST00000364353 104 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 Y_RNA.490-201ENST00000384413 102 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 Y_RNA.533-201ENST00000384596 114 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PDGFRAP16234 AL117342.1-201ENST00000404861 406 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 MTND3P8-201ENST00000412909 339 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.78□□□□□ -2.12
PDGFRAP16234 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.78□□□□□ -2.12
PDGFRAP16234 AC074290.1-201ENST00000448883 135 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 RN7SKP210-201ENST00000459176 261 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 AC011406.1-201ENST00000512440 370 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 RNU6-237P-201ENST00000515985 71 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 RNU6-1041P-201ENST00000516254 102 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 SNORA44.1-201ENST00000517031 108 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.78□□□□□ -2.12
PDGFRAP16234 MIR4285-201ENST00000581001 85 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 AL353997.5-201ENST00000618886 171 ntBASIC1.78□□□□□ -2.12
PDGFRAP16234 ZNF299P-201ENST00000406845 1804 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 RNU1-62P-201ENST00000362599 164 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 Y_RNA.72-201ENST00000362894 103 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 RNU1-17P-201ENST00000363022 152 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 RNU6-595P-201ENST00000363944 107 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 RNU6-296P-201ENST00000384608 107 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 RNA5SP213-201ENST00000391031 106 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 MTND1P2-201ENST00000430604 821 ntBASIC1.77□□□□□ -2.13
PDGFRAP16234 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms