Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.43□□□□□ -2.34
DEFA4P12838 MTCO3P8-201ENST00000453691 755 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 RNU7-21P-201ENST00000459430 62 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 RNU7-138P-201ENST00000459479 64 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 RNU7-57P-201ENST00000459540 60 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 RNU7-94P-201ENST00000459576 63 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 RNU6-1069P-201ENST00000516612 133 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 AC106038.2-201ENST00000520706 568 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 RNU6-323P-201ENST00000521915 107 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 MTND1P15-201ENST00000579262 949 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.43□□□□□ -2.34
DEFA4P12838 RNU6-85P-201ENST00000605989 107 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 MIR8070-201ENST00000616510 88 ntBASIC0.43□□□□□ -2.34
DEFA4P12838 RNU5F-7P-201ENST00000363696 115 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 RNU4-76P-201ENST00000364509 141 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 RNY4P34-201ENST00000364779 95 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 RNU6-163P-201ENST00000384396 106 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 RNA5SP323-201ENST00000391094 133 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 MIR1253-201ENST00000408273 105 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AC010154.1-201ENST00000425857 269 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 HSPE1P13-201ENST00000451143 297 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AL033528.1-201ENST00000453780 140 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 snoU13.6-201ENST00000458785 104 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 SNORD42A-201ENST00000459584 64 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.42□□□□□ -2.34
DEFA4P12838 RNU7-99P-201ENST00000516271 62 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AC007834.2-201ENST00000536310 343 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AC025423.5-201ENST00000550230 219 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AP000907.4-201ENST00000604143 237 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 U6.73-201ENST00000619194 103 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 AC006001.4-201ENST00000622243 395 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
DEFA4P12838 CASC19-280ENST00000642102 1351 ntBASIC0.42□□□□□ -2.34
DEFA4P12838 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
DEFA4P12838 Y_RNA.4-201ENST00000362333 112 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 RNU6-199P-201ENST00000362954 107 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 U3.8-201ENST00000363675 217 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 SNORD115-8-201ENST00000363856 82 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 SNORD115-38-201ENST00000365037 82 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 SNORA2.2-201ENST00000365473 135 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
DEFA4P12838 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 RNU6-733P-201ENST00000410759 104 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.41□□□□□ -2.34
DEFA4P12838 AC245047.3-201ENST00000429428 127 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 MTCO2P7-201ENST00000446518 666 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.41□□□□□ -2.34
DEFA4P12838 MTCO3P38-201ENST00000468910 766 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 HMGB1P29-201ENST00000505659 499 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 AC025465.4-201ENST00000513422 638 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 RNU6-1129P-201ENST00000515964 104 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.41□□□□□ -2.34
DEFA4P12838 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.41□□□□□ -2.34
DEFA4P12838 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.41□□□□□ -2.34
DEFA4P12838 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.41□□□□□ -2.34
DEFA4P12838 MTATP6P3-201ENST00000581686 676 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 AC090616.2-202ENST00000584248 222 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 AC137590.2-201ENST00000619709 240 ntBASIC0.41□□□□□ -2.34
DEFA4P12838 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RNA5SP361-201ENST00000362686 118 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RNU6-1305P-201ENST00000364353 104 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RNU6-245P-201ENST00000384020 107 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RNU6-925P-201ENST00000384629 104 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RNU6-903P-201ENST00000391270 109 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 MIR320B2-201ENST00000408479 138 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RNU6-248P-201ENST00000410720 107 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RNU6-57P-201ENST00000411348 103 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 AC133104.1-201ENST00000429100 218 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 RPL31P35-201ENST00000431058 377 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.4□□□□□ -2.35
DEFA4P12838 MTND4P32-201ENST00000437189 1237 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 HSFY5P-201ENST00000453726 309 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.4□□□□□ -2.35
DEFA4P12838 RNU6-922P-201ENST00000516753 99 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 AP002963.1-201ENST00000530590 184 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.4□□□□□ -2.35
DEFA4P12838 MIR4714-201ENST00000580728 77 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 MIR98-201ENST00000606724 119 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 U2.17-201ENST00000611454 95 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 MIR6788-201ENST00000618842 66 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 AC005609.4-201ENST00000625071 447 ntBASIC0.4□□□□□ -2.35
DEFA4P12838 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
DEFA4P12838 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 RNU6-517P-201ENST00000384362 110 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 AL031577.2-201ENST00000404133 280 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 MIR548J-201ENST00000408833 112 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 RNA5SP494-201ENST00000410653 129 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 RNA5SP504-201ENST00000410676 117 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.39□□□□□ -2.35
DEFA4P12838 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
DEFA4P12838 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.39□□□□□ -2.35
DEFA4P12838 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.39□□□□□ -2.35
DEFA4P12838 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms