Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 TPMTP2-201ENST00000414372 726 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 MTATP6P27-201ENST00000416987 621 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 C1DP2-201ENST00000418167 426 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 MTCO2P1-201ENST00000424648 477 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL6A3P12111 CALM2P2-201ENST00000428512 440 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 SNRPEP8-201ENST00000442866 260 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.28□□□□□ -2.45
COL6A3P12111 MTND3P4-201ENST00000453537 303 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 C1DP4-201ENST00000455429 424 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 BTF3P15-201ENST00000455606 336 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AC010376.1-201ENST00000522101 334 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AP003072.1-201ENST00000531740 145 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AC122134.1-202ENST00000569111 1201 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 MIR4436A-201ENST00000585278 85 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AL391903.3-201ENST00000612158 163 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL6A3P12111 AP000568.1-201ENST00000282964 442 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 RNU6-543P-201ENST00000362576 108 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 RNU6-650P-201ENST00000365658 111 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 RNU6-432P-201ENST00000384196 109 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 MTCO2P31-201ENST00000402702 684 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 MIR1305-201ENST00000408300 86 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL6A3P12111 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL6A3P12111 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL6A3P12111 AP003716.2-201ENST00000528260 108 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AC025678.1-201ENST00000567861 338 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AL162424.1-201ENST00000602325 221 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AC022022.2-201ENST00000602989 360 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL6A3P12111 MIR8054-201ENST00000620877 86 ntBASIC-0.28□□□□□ -2.45
COL6A3P12111 MTCO3P41-201ENST00000414801 328 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC019178.2-201ENST00000423595 505 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC010153.1-201ENST00000432862 727 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC002486.1-201ENST00000435098 391 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 MTCO2P7-201ENST00000446518 666 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AL050341.1-201ENST00000447743 313 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-274P-201ENST00000459566 107 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RPL37P6-201ENST00000460682 294 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC007215.1-201ENST00000464893 276 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 MTCO3P28-201ENST00000513351 515 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A3P12111 AC027419.1-201ENST00000522976 328 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC109446.1-201ENST00000566172 220 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 LARP7P2-201ENST00000575306 125 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 CBX3P9-201ENST00000402326 552 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AL356583.2-201ENST00000426536 280 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A3P12111 MTND4P25-201ENST00000441039 533 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AL929288.2-201ENST00000446368 407 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU7-94P-201ENST00000459576 63 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-848P-201ENST00000515948 107 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-617P-201ENST00000516147 107 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-473P-201ENST00000516164 107 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-528P-201ENST00000516926 100 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A3P12111 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
COL6A3P12111 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A3P12111 AK6P2-201ENST00000549020 471 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AL355816.2-201ENST00000610049 647 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 SCARNA4-202ENST00000625402 129 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
COL6A3P12111 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-747P-201ENST00000390928 104 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-241P-201ENST00000391148 104 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 SNORD111-201ENST00000408139 94 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 ZNF885P-201ENST00000420174 1098 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A3P12111 AC079354.2-201ENST00000453523 154 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU4-18P-201ENST00000516751 149 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNA5SP94-201ENST00000516917 108 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 AC095057.3-201ENST00000567102 1157 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 MIR499B-201ENST00000636498 73 ntBASIC-0.29□□□□□ -2.46
COL6A3P12111 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 RNU4-76P-201ENST00000364509 141 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 RNU6-622P-201ENST00000384272 103 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 Y_RNA.520-201ENST00000384556 102 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL6A3P12111 DPRXP1-201ENST00000426312 460 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 AC093019.1-201ENST00000443135 252 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 MTND1P17-201ENST00000448961 204 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 snoU13.8-201ENST00000458890 104 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 AC093519.1-201ENST00000566109 298 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 AC098679.4-201ENST00000624241 654 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 RNU6-199P-201ENST00000362954 107 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 RNU6-553P-201ENST00000364047 96 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 MIR421-201ENST00000365696 85 ntBASIC-0.3□□□□□ -2.46
COL6A3P12111 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms