Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.59□□□□□ -2.15
TOP1P11387 SUB1P4-201ENST00000566062 339 ntBASIC1.59□□□□□ -2.15
TOP1P11387 MIR3169-201ENST00000578032 83 ntBASIC1.59□□□□□ -2.15
TOP1P11387 AC078795.3-201ENST00000602913 472 ntBASIC1.59□□□□□ -2.15
TOP1P11387 AL356157.2-201ENST00000605122 111 ntBASIC1.59□□□□□ -2.15
TOP1P11387 AP000654.2-201ENST00000605633 586 ntBASIC1.59□□□□□ -2.15
TOP1P11387 MIR3976-201ENST00000606807 139 ntBASIC1.59□□□□□ -2.15
TOP1P11387 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
TOP1P11387 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
TOP1P11387 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TOP1P11387 RNU4-15P-201ENST00000362613 141 ntBASIC1.58□□□□□ -2.16
TOP1P11387 SNORD50.1-201ENST00000362987 71 ntBASIC1.58□□□□□ -2.16
TOP1P11387 RNU6-1013P-201ENST00000384180 107 ntBASIC1.58□□□□□ -2.16
TOP1P11387 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
TOP1P11387 RNU4-14P-201ENST00000410858 122 ntBASIC1.58□□□□□ -2.16
TOP1P11387 RNU6-1245P-201ENST00000411130 106 ntBASIC1.58□□□□□ -2.16
TOP1P11387 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.58□□□□□ -2.16
TOP1P11387 AC078809.1-201ENST00000427601 140 ntBASIC1.58□□□□□ -2.16
TOP1P11387 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.58□□□□□ -2.16
TOP1P11387 RPS3AP52-201ENST00000435639 297 ntBASIC1.58□□□□□ -2.16
TOP1P11387 AC244670.1-201ENST00000436879 112 ntBASIC1.58□□□□□ -2.16
TOP1P11387 MTCO1P44-201ENST00000441935 243 ntBASIC1.58□□□□□ -2.16
TOP1P11387 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.58□□□□□ -2.16
TOP1P11387 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.58□□□□□ -2.16
TOP1P11387 AC103851.1-201ENST00000506833 274 ntBASIC1.58□□□□□ -2.16
TOP1P11387 AC025465.3-201ENST00000510570 311 ntBASIC1.58□□□□□ -2.16
TOP1P11387 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
TOP1P11387 Y_RNA.691-201ENST00000516611 103 ntBASIC1.58□□□□□ -2.16
TOP1P11387 MRPS36P4-201ENST00000534436 298 ntBASIC1.58□□□□□ -2.16
TOP1P11387 HSPE1P4-201ENST00000550617 308 ntBASIC1.58□□□□□ -2.16
TOP1P11387 AL121579.1-201ENST00000555129 305 ntBASIC1.58□□□□□ -2.16
TOP1P11387 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.58□□□□□ -2.16
TOP1P11387 AL359821.1-201ENST00000605519 182 ntBASIC1.58□□□□□ -2.16
TOP1P11387 MIR8076-201ENST00000611401 83 ntBASIC1.58□□□□□ -2.16
TOP1P11387 AC092794.2-201ENST00000620933 563 ntBASIC1.58□□□□□ -2.16
TOP1P11387 Y_RNA.474-201ENST00000384341 102 ntBASIC1.57□□□□□ -2.16
TOP1P11387 RNU6-306P-201ENST00000384617 107 ntBASIC1.57□□□□□ -2.16
TOP1P11387 MIR517A-201ENST00000385001 87 ntBASIC1.57□□□□□ -2.16
TOP1P11387 RNU6-1106P-201ENST00000390845 107 ntBASIC1.57□□□□□ -2.16
TOP1P11387 AL357139.1-201ENST00000407792 426 ntBASIC1.57□□□□□ -2.16
TOP1P11387 MIR548F5-201ENST00000408421 86 ntBASIC1.57□□□□□ -2.16
TOP1P11387 USP9YP30-201ENST00000430729 455 ntBASIC1.57□□□□□ -2.16
TOP1P11387 AC098614.3-201ENST00000438957 440 ntBASIC1.57□□□□□ -2.16
TOP1P11387 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.57□□□□□ -2.16
TOP1P11387 AC079354.2-201ENST00000453523 154 ntBASIC1.57□□□□□ -2.16
TOP1P11387 PCMTD1P1-201ENST00000455560 355 ntBASIC1.57□□□□□ -2.16
TOP1P11387 snoU13.9-201ENST00000458927 103 ntBASIC1.57□□□□□ -2.16
TOP1P11387 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
TOP1P11387 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.57□□□□□ -2.16
TOP1P11387 SNRPGP7-201ENST00000469016 106 ntBASIC1.57□□□□□ -2.16
TOP1P11387 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.57□□□□□ -2.16
TOP1P11387 MIR4790-201ENST00000577799 79 ntBASIC1.57□□□□□ -2.16
TOP1P11387 MIR548S-201ENST00000581352 82 ntBASIC1.57□□□□□ -2.16
TOP1P11387 AC005730.3-201ENST00000583067 366 ntBASIC1.57□□□□□ -2.16
TOP1P11387 POLR3GP2-201ENST00000588366 668 ntBASIC1.57□□□□□ -2.16
TOP1P11387 AC005786.1-201ENST00000588553 154 ntBASIC1.57□□□□□ -2.16
TOP1P11387 AC018889.1-201ENST00000605372 397 ntBASIC1.57□□□□□ -2.16
TOP1P11387 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.57□□□□□ -2.16
TOP1P11387 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.57□□□□□ -2.16
TOP1P11387 AP000560.1-201ENST00000624150 1937 ntBASIC1.57□□□□□ -2.16
TOP1P11387 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.56□□□□□ -2.16
TOP1P11387 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
TOP1P11387 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TOP1P11387 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TOP1P11387 AL391987.6-201ENST00000305671 199 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU5B-2P-201ENST00000363036 113 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU6-1059P-201ENST00000363752 98 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU6-842P-201ENST00000384269 107 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU6-784P-201ENST00000384330 106 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
TOP1P11387 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.56□□□□□ -2.16
TOP1P11387 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.56□□□□□ -2.16
TOP1P11387 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.56□□□□□ -2.16
TOP1P11387 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.56□□□□□ -2.16
TOP1P11387 MTND3P10-201ENST00000450967 341 ntBASIC1.56□□□□□ -2.16
TOP1P11387 SNORD5.1-201ENST00000458800 75 ntBASIC1.56□□□□□ -2.16
TOP1P11387 U8.21-201ENST00000459536 136 ntBASIC1.56□□□□□ -2.16
TOP1P11387 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
TOP1P11387 AC022447.4-201ENST00000504053 364 ntBASIC1.56□□□□□ -2.16
TOP1P11387 AC026782.1-201ENST00000512952 449 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU6-507P-201ENST00000516045 100 ntBASIC1.56□□□□□ -2.16
TOP1P11387 RNU6-875P-201ENST00000516488 106 ntBASIC1.56□□□□□ -2.16
TOP1P11387 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
TOP1P11387 AC134698.4-201ENST00000523451 826 ntBASIC1.56□□□□□ -2.16
TOP1P11387 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.56□□□□□ -2.16
TOP1P11387 UBE2V2P2-201ENST00000587677 504 ntBASIC1.56□□□□□ -2.16
TOP1P11387 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.56□□□□□ -2.16
TOP1P11387 AC019193.3-201ENST00000609144 554 ntBASIC1.56□□□□□ -2.16
TOP1P11387 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
TOP1P11387 SNORD98-201ENST00000636377 67 ntBASIC1.56□□□□□ -2.16
TOP1P11387 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
TOP1P11387 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
TOP1P11387 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TOP1P11387 Y_RNA.123-201ENST00000363338 102 ntBASIC1.55□□□□□ -2.16
TOP1P11387 RNU6-142P-201ENST00000384019 107 ntBASIC1.55□□□□□ -2.16
TOP1P11387 SNORA29-201ENST00000384183 140 ntBASIC1.55□□□□□ -2.16
TOP1P11387 Y_RNA.473-201ENST00000384333 102 ntBASIC1.55□□□□□ -2.16
TOP1P11387 Y_RNA.504-201ENST00000384481 104 ntBASIC1.55□□□□□ -2.16
TOP1P11387 MIR521-1-201ENST00000384902 87 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 689.4 ms