Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU6-917P-201ENST00000516294 104 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 DEFB131C-201ENST00000528817 165 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 PCMTD1P2-201ENST00000565017 355 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 AL391840.1-201ENST00000571144 367 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 AL390123.1-201ENST00000603216 237 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 AC013244.3-201ENST00000605614 388 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.14□□□□□ -2.39
FREM3P0C091 AP000568.1-201ENST00000282964 442 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 RNU6-39P-201ENST00000384344 107 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 RNU6-348P-201ENST00000384386 107 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 MTND3P17-201ENST00000416968 344 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 AL606662.1-201ENST00000445763 553 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.14□□□□□ -2.39
FREM3P0C091 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.14□□□□□ -2.39
FREM3P0C091 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.14□□□□□ -2.39
FREM3P0C091 AC134026.1-201ENST00000623249 2239 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 Y_RNA.97-201ENST00000363094 102 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 RNU6-245P-201ENST00000384020 107 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 RNU6-906P-201ENST00000384700 70 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 MIR653-201ENST00000385279 96 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 RNA5SP504-201ENST00000410676 117 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AL117339.3-201ENST00000418733 162 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 MED13P1-201ENST00000428342 171 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 TIMM9P3-201ENST00000428659 274 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 RPL37P21-201ENST00000435890 276 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.13□□□□□ -2.39
FREM3P0C091 EXOSC3P1-201ENST00000448649 500 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.13□□□□□ -2.39
FREM3P0C091 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.13□□□□□ -2.39
FREM3P0C091 BNIP3P40-201ENST00000596017 556 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AC068792.1-201ENST00000621354 417 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.13□□□□□ -2.39
FREM3P0C091 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
FREM3P0C091 SNORA33-201ENST00000363664 130 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 Y_RNA.167-201ENST00000363735 109 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 RNU6-975P-201ENST00000384296 105 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 RNU6-57P-201ENST00000411348 103 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 Z99497.1-201ENST00000421282 135 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.13□□□□□ -2.39
FREM3P0C091 RPL23AP50-201ENST00000434149 455 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.13□□□□□ -2.39
FREM3P0C091 snoU13.25-201ENST00000458945 104 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AC104136.1-201ENST00000512969 394 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 SNORA19.3-201ENST00000516165 130 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 RNU6-948P-201ENST00000516374 107 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AC022878.1-201ENST00000530684 149 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.13□□□□□ -2.39
FREM3P0C091 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.13□□□□□ -2.39
FREM3P0C091 LARP7P1-201ENST00000605576 316 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AL391903.3-201ENST00000612158 163 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AL627230.5-201ENST00000619807 58 ntBASIC0.13□□□□□ -2.39
FREM3P0C091 AC090625.1-201ENST00000357130 210 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 Y_RNA.18-201ENST00000362461 102 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 RNU6-433P-201ENST00000363216 104 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 MRPL42P3-201ENST00000401492 326 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.12□□□□□ -2.39
FREM3P0C091 MTND3P1-201ENST00000441336 220 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.12□□□□□ -2.39
FREM3P0C091 AC009237.7-201ENST00000447357 229 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 USP9YP25-201ENST00000457708 443 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 U7.7-201ENST00000459276 60 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.12□□□□□ -2.39
FREM3P0C091 AC113410.1-201ENST00000505029 247 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.12□□□□□ -2.39
FREM3P0C091 AC025465.4-201ENST00000513422 638 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.12□□□□□ -2.39
FREM3P0C091 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.12□□□□□ -2.39
FREM3P0C091 RNU6-923P-201ENST00000364753 107 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 RPS29P13-201ENST00000402041 169 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 MIR1265-201ENST00000408444 86 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
FREM3P0C091 AC244098.3-201ENST00000424803 96 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.11□□□□□ -2.39
FREM3P0C091 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.11□□□□□ -2.39
FREM3P0C091 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.11□□□□□ -2.39
FREM3P0C091 SUB1P2-201ENST00000556401 297 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AC004584.2-201ENST00000570407 410 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AC068137.4-201ENST00000638485 296 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 MIR103A1-201ENST00000362165 78 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 RNU6-1286P-201ENST00000383871 107 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 RNU6-163P-201ENST00000384396 106 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 Y_RNA.576-201ENST00000384781 102 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.11□□□□□ -2.39
FREM3P0C091 AC093019.1-201ENST00000443135 252 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AL049830.1-201ENST00000468034 425 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.11□□□□□ -2.39
FREM3P0C091 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.11□□□□□ -2.39
FREM3P0C091 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.11□□□□□ -2.39
FREM3P0C091 AC004223.2-201ENST00000590309 544 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 AL158211.2-201ENST00000607282 395 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
FREM3P0C091 AL445984.1-201ENST00000637834 659 ntBASIC0.11□□□□□ -2.39
FREM3P0C091 RNY1P8-201ENST00000383970 114 ntBASIC0.1□□□□□ -2.39
FREM3P0C091 RNU6-541P-201ENST00000384709 110 ntBASIC0.1□□□□□ -2.39
FREM3P0C091 RNA5SP222-201ENST00000411039 105 ntBASIC0.1□□□□□ -2.39
FREM3P0C091 AC010975.2-201ENST00000427781 588 ntBASIC0.1□□□□□ -2.39
FREM3P0C091 AL133217.1-201ENST00000450980 425 ntBASIC0.1□□□□□ -2.39
FREM3P0C091 NDUFB4P10-201ENST00000452541 359 ntBASIC0.1□□□□□ -2.39
FREM3P0C091 AC008628.2-201ENST00000502605 298 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms