Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
CXCL1P09341 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.01□□□□□ -2.41
CXCL1P09341 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.01□□□□□ -2.41
CXCL1P09341 MIR3192-201ENST00000584920 77 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 RNU6-550P-201ENST00000391057 101 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 U8.16-201ENST00000391279 133 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 MRPL42P2-201ENST00000403169 426 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 MIR1827-201ENST00000408549 66 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 RNU2-72P-201ENST00000411175 163 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 AL031274.1-201ENST00000450334 232 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.02□□□□□ -2.41
CXCL1P09341 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.02□□□□□ -2.41
CXCL1P09341 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 MTND4LP18-201ENST00000526864 291 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.02□□□□□ -2.41
CXCL1P09341 AC025449.1-201ENST00000603896 529 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.02□□□□□ -2.41
CXCL1P09341 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 AC022418.1-201ENST00000624118 445 ntBASIC-0.02□□□□□ -2.41
CXCL1P09341 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 RNU6-533P-201ENST00000384144 107 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 SNORD111-201ENST00000408139 94 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 RNU2-70P-201ENST00000410718 179 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.03□□□□□ -2.41
CXCL1P09341 MTCO3P8-201ENST00000453691 755 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 snoU13.6-201ENST00000458785 104 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AC007215.1-201ENST00000464893 276 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.03□□□□□ -2.41
CXCL1P09341 AC010493.1-201ENST00000513479 292 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 RNU7-28P-201ENST00000516759 62 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 SNORA25.17-201ENST00000517184 124 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AP003181.2-201ENST00000528941 181 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.03□□□□□ -2.41
CXCL1P09341 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.03□□□□□ -2.41
CXCL1P09341 EIF1P4-201ENST00000572664 335 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AC068790.2-201ENST00000602601 557 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AL121992.2-201ENST00000606262 256 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AL021368.1-201ENST00000607490 540 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AL078595.3-201ENST00000623815 1166 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 AL078596.1-201ENST00000624856 447 ntBASIC-0.03□□□□□ -2.41
CXCL1P09341 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.03□□□□□ -2.41
CXCL1P09341 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
CXCL1P09341 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CXCL1P09341 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 RNU4-45P-201ENST00000365469 141 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 RNU6-42P-201ENST00000384165 107 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AL663109.1-201ENST00000411498 844 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 MTND1P20-201ENST00000430341 950 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.04□□□□□ -2.42
CXCL1P09341 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.04□□□□□ -2.42
CXCL1P09341 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AC016550.1-201ENST00000505348 785 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.04□□□□□ -2.42
CXCL1P09341 RNU6-430P-201ENST00000517078 107 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AC022616.3-201ENST00000523940 148 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.04□□□□□ -2.42
CXCL1P09341 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.04□□□□□ -2.42
CXCL1P09341 7SK.7-201ENST00000603504 247 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AL078603.1-201ENST00000603824 313 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AP000907.4-201ENST00000604143 237 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AC104010.1-201ENST00000616889 150 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 AC068792.1-201ENST00000621354 417 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 MIR4315-1-201ENST00000636800 73 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 MIR4315-2-201ENST00000640925 73 ntBASIC-0.04□□□□□ -2.42
CXCL1P09341 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.04□□□□□ -2.42
CXCL1P09341 MIR103A1-201ENST00000362165 78 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.05□□□□□ -2.42
CXCL1P09341 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 MIR499A-201ENST00000384903 122 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 RNU1-139P-201ENST00000391307 165 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 MTCO2P21-201ENST00000419780 677 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.05□□□□□ -2.42
CXCL1P09341 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.05□□□□□ -2.42
CXCL1P09341 RPL31P35-201ENST00000431058 377 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 SNRPGP12-201ENST00000449481 213 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AC093850.1-201ENST00000454121 251 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AP000870.1-201ENST00000472927 406 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AF235103.2-201ENST00000525753 346 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AC036111.3-201ENST00000526389 112 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AC112191.3-201ENST00000604371 277 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 AC011155.2-201ENST00000623202 216 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 MIR6079-201ENST00000635807 62 ntBASIC-0.05□□□□□ -2.42
CXCL1P09341 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.05□□□□□ -2.42
CXCL1P09341 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.06□□□□□ -2.42
CXCL1P09341 RNA5SP62-201ENST00000363457 110 ntBASIC-0.06□□□□□ -2.42
CXCL1P09341 RNU4-67P-201ENST00000364569 141 ntBASIC-0.06□□□□□ -2.42
CXCL1P09341 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
CXCL1P09341 MIR32-201ENST00000384965 70 ntBASIC-0.06□□□□□ -2.42
CXCL1P09341 MIR1185-1-201ENST00000408598 86 ntBASIC-0.06□□□□□ -2.42
CXCL1P09341 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.06□□□□□ -2.42
CXCL1P09341 RNU7-12P-201ENST00000516030 62 ntBASIC-0.06□□□□□ -2.42
CXCL1P09341 RNU6-344P-201ENST00000516635 111 ntBASIC-0.06□□□□□ -2.42
CXCL1P09341 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.06□□□□□ -2.42
CXCL1P09341 AL117336.2-201ENST00000602435 335 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms