Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.78□□□□□ -1.96
RHOP08100 SNORD113-5-201ENST00000607261 78 ntBASIC2.78□□□□□ -1.96
RHOP08100 AL357075.2-201ENST00000614906 189 ntBASIC2.78□□□□□ -1.96
RHOP08100 AL590808.1-201ENST00000618696 141 ntBASIC2.78□□□□□ -1.96
RHOP08100 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.78□□□□□ -1.96
RHOP08100 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.78□□□□□ -1.96
RHOP08100 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
RHOP08100 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RHOP08100 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.78□□□□□ -1.96
RHOP08100 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
RHOP08100 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
RHOP08100 AC093831.2-201ENST00000624393 3427 ntBASIC2.78□□□□□ -1.96
RHOP08100 AL359854.1-201ENST00000614203 1594 ntBASIC2.78□□□□□ -1.96
RHOP08100 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RHOP08100 MTND5P35-201ENST00000557537 1720 ntBASIC2.77□□□□□ -1.97
RHOP08100 Y_RNA.16-201ENST00000362421 102 ntBASIC2.77□□□□□ -1.97
RHOP08100 Y_RNA.179-201ENST00000363844 90 ntBASIC2.77□□□□□ -1.97
RHOP08100 RNU6-961P-201ENST00000363893 105 ntBASIC2.77□□□□□ -1.97
RHOP08100 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RHOP08100 RNU6-793P-201ENST00000384233 104 ntBASIC2.77□□□□□ -1.97
RHOP08100 RNU6-378P-201ENST00000384324 107 ntBASIC2.77□□□□□ -1.97
RHOP08100 MT-TR-201ENST00000387439 65 ntBASIC2.77□□□□□ -1.97
RHOP08100 MIR1261-201ENST00000408659 82 ntBASIC2.77□□□□□ -1.97
RHOP08100 Y_RNA.602-201ENST00000410535 92 ntBASIC2.77□□□□□ -1.97
RHOP08100 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.77□□□□□ -1.97
RHOP08100 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.77□□□□□ -1.97
RHOP08100 AC010095.1-201ENST00000443543 144 ntBASIC2.77□□□□□ -1.97
RHOP08100 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.77□□□□□ -1.97
RHOP08100 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.77□□□□□ -1.97
RHOP08100 AC091179.3-201ENST00000474761 144 ntBASIC2.77□□□□□ -1.97
RHOP08100 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
RHOP08100 SEPT14P8-201ENST00000508026 178 ntBASIC2.77□□□□□ -1.97
RHOP08100 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.77□□□□□ -1.97
RHOP08100 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
RHOP08100 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.77□□□□□ -1.97
RHOP08100 EIF4A1P12-201ENST00000551910 141 ntBASIC2.77□□□□□ -1.97
RHOP08100 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.77□□□□□ -1.97
RHOP08100 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.77□□□□□ -1.97
RHOP08100 SNRPGP20-201ENST00000604477 205 ntBASIC2.77□□□□□ -1.97
RHOP08100 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.77□□□□□ -1.97
RHOP08100 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.77□□□□□ -1.97
RHOP08100 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RHOP08100 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RHOP08100 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RHOP08100 U8.9-201ENST00000365667 134 ntBASIC2.76□□□□□ -1.97
RHOP08100 RNU6-1083P-201ENST00000384022 107 ntBASIC2.76□□□□□ -1.97
RHOP08100 RNU6-20P-201ENST00000384106 107 ntBASIC2.76□□□□□ -1.97
RHOP08100 Y_RNA.539-201ENST00000384635 107 ntBASIC2.76□□□□□ -1.97
RHOP08100 MIR887-201ENST00000401258 79 ntBASIC2.76□□□□□ -1.97
RHOP08100 AL451074.5-201ENST00000415894 435 ntBASIC2.76□□□□□ -1.97
RHOP08100 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.76□□□□□ -1.97
RHOP08100 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.76□□□□□ -1.97
RHOP08100 SERF1AP1-201ENST00000514575 187 ntBASIC2.76□□□□□ -1.97
RHOP08100 RNA5SP282-201ENST00000516355 108 ntBASIC2.76□□□□□ -1.97
RHOP08100 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
RHOP08100 RNU6-111P-201ENST00000517179 105 ntBASIC2.76□□□□□ -1.97
RHOP08100 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.76□□□□□ -1.97
RHOP08100 AC027176.1-201ENST00000560204 514 ntBASIC2.76□□□□□ -1.97
RHOP08100 MIR3605-201ENST00000583214 100 ntBASIC2.76□□□□□ -1.97
RHOP08100 U2.14-201ENST00000615943 113 ntBASIC2.76□□□□□ -1.97
RHOP08100 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.76□□□□□ -1.97
RHOP08100 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
RHOP08100 RNU6-626P-201ENST00000363354 107 ntBASIC2.75□□□□□ -1.97
RHOP08100 U3.9-201ENST00000363823 204 ntBASIC2.75□□□□□ -1.97
RHOP08100 RNY1-201ENST00000364228 113 ntBASIC2.75□□□□□ -1.97
RHOP08100 Y_RNA.515-201ENST00000384535 112 ntBASIC2.75□□□□□ -1.97
RHOP08100 AL512633.1-201ENST00000399931 655 ntBASIC2.75□□□□□ -1.97
RHOP08100 EIF4EP4-201ENST00000424916 578 ntBASIC2.75□□□□□ -1.97
RHOP08100 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.75□□□□□ -1.97
RHOP08100 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.75□□□□□ -1.97
RHOP08100 IFNA11P-201ENST00000446352 526 ntBASIC2.75□□□□□ -1.97
RHOP08100 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
RHOP08100 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.75□□□□□ -1.97
RHOP08100 SCARNA11.3-201ENST00000517276 130 ntBASIC2.75□□□□□ -1.97
RHOP08100 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.75□□□□□ -1.97
RHOP08100 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.75□□□□□ -1.97
RHOP08100 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.75□□□□□ -1.97
RHOP08100 MZT1P2-201ENST00000604387 248 ntBASIC2.75□□□□□ -1.97
RHOP08100 AC011373.1-201ENST00000607270 237 ntBASIC2.75□□□□□ -1.97
RHOP08100 MIR6715A-201ENST00000615929 79 ntBASIC2.75□□□□□ -1.97
RHOP08100 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
RHOP08100 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.75□□□□□ -1.97
RHOP08100 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RHOP08100 AC069528.2-201ENST00000624849 1991 ntBASIC2.74□□□□□ -1.97
RHOP08100 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RHOP08100 RNU6-326P-201ENST00000365480 107 ntBASIC2.74□□□□□ -1.97
RHOP08100 SNORA46.1-201ENST00000391069 153 ntBASIC2.74□□□□□ -1.97
RHOP08100 AL603910.2-201ENST00000407268 136 ntBASIC2.74□□□□□ -1.97
RHOP08100 RNU2-64P-201ENST00000411315 191 ntBASIC2.74□□□□□ -1.97
RHOP08100 AC009310.1-201ENST00000414414 451 ntBASIC2.74□□□□□ -1.97
RHOP08100 AC009963.1-201ENST00000417265 157 ntBASIC2.74□□□□□ -1.97
RHOP08100 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
RHOP08100 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.74□□□□□ -1.97
RHOP08100 UQCRBP2-201ENST00000447827 297 ntBASIC2.74□□□□□ -1.97
RHOP08100 AC145146.1-201ENST00000496370 254 ntBASIC2.74□□□□□ -1.97
RHOP08100 MRPS36P2-201ENST00000512569 299 ntBASIC2.74□□□□□ -1.97
RHOP08100 RNA5SP112-201ENST00000515937 99 ntBASIC2.74□□□□□ -1.97
RHOP08100 RNU6-344P-201ENST00000516635 111 ntBASIC2.74□□□□□ -1.97
RHOP08100 AC018448.1-201ENST00000552843 316 ntBASIC2.74□□□□□ -1.97
RHOP08100 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms