Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SNORD100-201ENST00000408573 76 ntBASIC-0.66□□□□□ -2.52
APOBP04114 USP9YP11-201ENST00000427537 717 ntBASIC-0.66□□□□□ -2.52
APOBP04114 AL162725.1-201ENST00000435405 301 ntBASIC-0.66□□□□□ -2.52
APOBP04114 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.66□□□□□ -2.52
APOBP04114 AL451064.1-201ENST00000607718 471 ntBASIC-0.66□□□□□ -2.52
APOBP04114 MIR6514-201ENST00000622549 70 ntBASIC-0.66□□□□□ -2.52
APOBP04114 AC106754.2-201ENST00000623006 233 ntBASIC-0.66□□□□□ -2.52
APOBP04114 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.66□□□□□ -2.52
APOBP04114 SNORA32.2-201ENST00000384049 122 ntBASIC-0.67□□□□□ -2.52
APOBP04114 MIR653-201ENST00000385279 96 ntBASIC-0.67□□□□□ -2.52
APOBP04114 MTCO3P1-205ENST00000422088 832 ntBASIC-0.67□□□□□ -2.52
APOBP04114 POLR2KP2-201ENST00000438155 177 ntBASIC-0.67□□□□□ -2.52
APOBP04114 AC093850.1-201ENST00000454121 251 ntBASIC-0.67□□□□□ -2.52
APOBP04114 RNU6-274P-201ENST00000459566 107 ntBASIC-0.67□□□□□ -2.52
APOBP04114 RNU6-678P-201ENST00000516832 109 ntBASIC-0.67□□□□□ -2.52
APOBP04114 AL603839.4-201ENST00000624658 1005 ntBASIC-0.67□□□□□ -2.52
APOBP04114 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.67□□□□□ -2.52
APOBP04114 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.67□□□□□ -2.52
APOBP04114 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.67□□□□□ -2.52
APOBP04114 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.67□□□□□ -2.52
APOBP04114 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.67□□□□□ -2.52
APOBP04114 RNU6-706P-201ENST00000517229 104 ntBASIC-0.67□□□□□ -2.52
APOBP04114 MIR3136-201ENST00000583498 78 ntBASIC-0.67□□□□□ -2.52
APOBP04114 AC078795.3-201ENST00000602913 472 ntBASIC-0.67□□□□□ -2.52
APOBP04114 MIR802-201ENST00000390235 94 ntBASIC-0.67□□□□□ -2.52
APOBP04114 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.67□□□□□ -2.52
APOBP04114 AL133217.1-201ENST00000450980 425 ntBASIC-0.67□□□□□ -2.52
APOBP04114 AC090186.1-201ENST00000605991 572 ntBASIC-0.67□□□□□ -2.52
APOBP04114 AC068792.1-201ENST00000621354 417 ntBASIC-0.67□□□□□ -2.52
APOBP04114 MTND1P33-201ENST00000446251 917 ntBASIC-0.67□□□□□ -2.52
APOBP04114 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.67□□□□□ -2.52
APOBP04114 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.67□□□□□ -2.52
APOBP04114 U8.15-201ENST00000390947 134 ntBASIC-0.68□□□□□ -2.52
APOBP04114 SSR1P2-201ENST00000415208 787 ntBASIC-0.68□□□□□ -2.52
APOBP04114 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.68□□□□□ -2.52
APOBP04114 AC010133.1-201ENST00000615809 842 ntBASIC-0.68□□□□□ -2.52
APOBP04114 AL451054.2-201ENST00000420896 202 ntBASIC-0.68□□□□□ -2.52
APOBP04114 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.68□□□□□ -2.52
APOBP04114 AC092427.1-201ENST00000439177 601 ntBASIC-0.68□□□□□ -2.52
APOBP04114 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.68□□□□□ -2.52
APOBP04114 AC018889.1-201ENST00000605372 397 ntBASIC-0.68□□□□□ -2.52
APOBP04114 AP002802.2-201ENST00000605877 235 ntBASIC-0.68□□□□□ -2.52
APOBP04114 MIR335-201ENST00000362173 94 ntBASIC-0.68□□□□□ -2.52
APOBP04114 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.68□□□□□ -2.52
APOBP04114 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.68□□□□□ -2.52
APOBP04114 RNY4-201ENST00000516507 96 ntBASIC-0.68□□□□□ -2.52
APOBP04114 RNU6-843P-201ENST00000384454 104 ntBASIC-0.69□□□□□ -2.52
APOBP04114 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
APOBP04114 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.69□□□□□ -2.52
APOBP04114 AC015724.1-201ENST00000478577 156 ntBASIC-0.69□□□□□ -2.52
APOBP04114 SNORD31B-201ENST00000364977 69 ntBASIC-0.69□□□□□ -2.52
APOBP04114 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.69□□□□□ -2.52
APOBP04114 AL133264.1-201ENST00000407157 562 ntBASIC-0.69□□□□□ -2.52
APOBP04114 RNU6-948P-201ENST00000516374 107 ntBASIC-0.69□□□□□ -2.52
APOBP04114 AC013828.2-201ENST00000532487 235 ntBASIC-0.69□□□□□ -2.52
APOBP04114 MIR873-201ENST00000401120 77 ntBASIC-0.69□□□□□ -2.52
APOBP04114 ZNF885P-201ENST00000420174 1098 ntBASIC-0.69□□□□□ -2.52
APOBP04114 RPL32P14-201ENST00000463196 378 ntBASIC-0.69□□□□□ -2.52
APOBP04114 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.69□□□□□ -2.52
APOBP04114 RNU6-983P-201ENST00000516004 103 ntBASIC-0.69□□□□□ -2.52
APOBP04114 RNU4-49P-201ENST00000516080 140 ntBASIC-0.69□□□□□ -2.52
APOBP04114 AL136221.1-201ENST00000621449 509 ntBASIC-0.69□□□□□ -2.52
APOBP04114 AC131159.1-201ENST00000621854 213 ntBASIC-0.69□□□□□ -2.52
APOBP04114 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
APOBP04114 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.69□□□□□ -2.52
APOBP04114 AC007919.1-201ENST00000429380 217 ntBASIC-0.69□□□□□ -2.52
APOBP04114 MTCYBP39-201ENST00000437562 491 ntBASIC-0.69□□□□□ -2.52
APOBP04114 snoU83B.1-201ENST00000517136 88 ntBASIC-0.69□□□□□ -2.52
APOBP04114 MIR4770-201ENST00000579149 58 ntBASIC-0.69□□□□□ -2.52
APOBP04114 RPL17P51-201ENST00000605218 238 ntBASIC-0.69□□□□□ -2.52
APOBP04114 MIR6129-201ENST00000616087 109 ntBASIC-0.69□□□□□ -2.52
APOBP04114 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.7□□□□□ -2.52
APOBP04114 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.7□□□□□ -2.52
APOBP04114 RNU4-30P-201ENST00000410245 143 ntBASIC-0.7□□□□□ -2.52
APOBP04114 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.7□□□□□ -2.52
APOBP04114 AC133104.1-201ENST00000429100 218 ntBASIC-0.7□□□□□ -2.52
APOBP04114 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.7□□□□□ -2.52
APOBP04114 SEC63P2-201ENST00000503863 1939 ntBASIC-0.7□□□□□ -2.52
APOBP04114 RNU6-502P-201ENST00000362419 108 ntBASIC-0.7□□□□□ -2.52
APOBP04114 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
APOBP04114 AC079382.1-201ENST00000493346 557 ntBASIC-0.7□□□□□ -2.52
APOBP04114 MTCO3P9-201ENST00000506989 781 ntBASIC-0.7□□□□□ -2.52
APOBP04114 MIR655-201ENST00000362159 97 ntBASIC-0.7□□□□□ -2.52
APOBP04114 MTND4P15-201ENST00000437913 1033 ntBASIC-0.7□□□□□ -2.52
APOBP04114 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.7□□□□□ -2.52
APOBP04114 AC107027.2-201ENST00000512197 115 ntBASIC-0.7□□□□□ -2.52
APOBP04114 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.71□□□□□ -2.52
APOBP04114 AC010385.1-201ENST00000412374 256 ntBASIC-0.71□□□□□ -2.52
APOBP04114 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.71□□□□□ -2.52
APOBP04114 MED28P2-201ENST00000475771 317 ntBASIC-0.71□□□□□ -2.52
APOBP04114 MIR2115-201ENST00000516657 100 ntBASIC-0.71□□□□□ -2.52
APOBP04114 AL158050.2-201ENST00000605336 568 ntBASIC-0.71□□□□□ -2.52
APOBP04114 RNU6-658P-201ENST00000384606 106 ntBASIC-0.71□□□□□ -2.52
APOBP04114 RNU6-796P-201ENST00000391086 107 ntBASIC-0.71□□□□□ -2.52
APOBP04114 ART2BP-201ENST00000453501 499 ntBASIC-0.71□□□□□ -2.52
APOBP04114 DEFB131D-201ENST00000526803 184 ntBASIC-0.71□□□□□ -2.52
APOBP04114 DEFB131C-201ENST00000528817 165 ntBASIC-0.71□□□□□ -2.52
APOBP04114 MIR377-201ENST00000362145 69 ntBASIC-0.71□□□□□ -2.52
APOBP04114 ELOCP21-201ENST00000412558 336 ntBASIC-0.71□□□□□ -2.52
APOBP04114 MTND4P21-201ENST00000453886 1357 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms