Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MIR32-201ENST00000384965 70 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 RNU6-918P-201ENST00000391219 106 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 RPS4XP3-201ENST00000398541 413 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 IFNWP4-201ENST00000453148 294 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 AC092798.1-201ENST00000458542 409 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 Y_RNA.650-201ENST00000459002 102 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.86□□□□□ -1.95
COL3A1P02461 SNORA27.4-201ENST00000516650 95 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 Y_RNA.777-201ENST00000516982 102 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 RNA5SP402-201ENST00000517148 110 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 Y_RNA.771-201ENST00000598668 102 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 AC108706.1-201ENST00000611053 297 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 AC104465.1-201ENST00000611365 139 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 Y_RNA.789-201ENST00000622480 102 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 SCARNA4-201ENST00000629045 128 ntBASIC2.86□□□□□ -1.95
COL3A1P02461 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL3A1P02461 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
COL3A1P02461 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL3A1P02461 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL3A1P02461 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL3A1P02461 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL3A1P02461 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL3A1P02461 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL3A1P02461 UBE2WP1-201ENST00000362030 340 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RNU6-626P-201ENST00000363354 107 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RNU6-527P-201ENST00000363425 104 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 SNORD115-32-201ENST00000364079 82 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL3A1P02461 Y_RNA.383-201ENST00000383855 97 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RNU6-968P-201ENST00000384076 107 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 MIR153-2-201ENST00000385225 87 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RNU4-30P-201ENST00000410245 143 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 SNORD12B-201ENST00000410433 91 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RNU6-651P-201ENST00000411040 105 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RPL23AP36-201ENST00000413895 458 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.85□□□□□ -1.95
COL3A1P02461 EIF1AXP1-201ENST00000419267 435 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.85□□□□□ -1.95
COL3A1P02461 AL078601.1-201ENST00000444542 271 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AL353705.4-201ENST00000449661 238 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.85□□□□□ -1.95
COL3A1P02461 AC007395.1-201ENST00000451333 677 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.85□□□□□ -1.95
COL3A1P02461 snoU109.2-201ENST00000459316 135 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC087477.1-201ENST00000465747 340 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC010265.1-201ENST00000513509 211 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 RNA5SP291-201ENST00000517222 105 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 MTND5P41-201ENST00000517498 206 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.85□□□□□ -1.95
COL3A1P02461 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC010928.2-201ENST00000588017 287 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC008749.1-201ENST00000597650 306 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC027309.3-201ENST00000623419 351 ntBASIC2.85□□□□□ -1.95
COL3A1P02461 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.85□□□□□ -1.95
COL3A1P02461 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.85□□□□□ -1.95
COL3A1P02461 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL3A1P02461 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
COL3A1P02461 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL3A1P02461 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
COL3A1P02461 RNU6-222P-201ENST00000362438 107 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 Y_RNA.286-201ENST00000364813 102 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 Y_RNA.398-201ENST00000383952 99 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 RNU6-318P-201ENST00000384283 103 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 SNORA48.3-201ENST00000391081 134 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 RNU1-139P-201ENST00000391307 165 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 MIR1290-201ENST00000408735 78 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 RNU2-51P-201ENST00000410708 197 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 RNU6-1135P-201ENST00000411083 103 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.84□□□□□ -1.95
COL3A1P02461 AC073901.1-201ENST00000462471 408 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 RNA5SP458-201ENST00000516188 119 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 RN7SKP49-201ENST00000516675 260 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.84□□□□□ -1.95
COL3A1P02461 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.84□□□□□ -1.95
COL3A1P02461 AC011921.3-201ENST00000605540 361 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.84□□□□□ -1.95
COL3A1P02461 AC073349.3-201ENST00000617616 186 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 SCARNA4-202ENST00000625402 129 ntBASIC2.84□□□□□ -1.95
COL3A1P02461 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.84□□□□□ -1.95
COL3A1P02461 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.84□□□□□ -1.95
COL3A1P02461 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
COL3A1P02461 MIR410-201ENST00000362222 80 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 Z85995.1-201ENST00000415547 335 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 AC006026.2-201ENST00000457376 180 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.84□□□□□ -1.96
COL3A1P02461 RPL30P1-201ENST00000488676 339 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 AC139453.3-201ENST00000493276 369 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 RNU6-1114P-201ENST00000516022 107 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 AP005660.1-201ENST00000522972 293 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.84□□□□□ -1.96
COL3A1P02461 AP002826.1-201ENST00000608835 315 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 AC005296.1-201ENST00000616145 209 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 MIR6873-201ENST00000622788 63 ntBASIC2.84□□□□□ -1.96
COL3A1P02461 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.84□□□□□ -1.96
COL3A1P02461 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL3A1P02461 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL3A1P02461 RNU6-78P-201ENST00000362897 107 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 Y_RNA.81-201ENST00000362997 102 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms