Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.45□□□□□ -2.48
SIX6O95475 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.45□□□□□ -2.48
SIX6O95475 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.45□□□□□ -2.48
SIX6O95475 RN7SKP164-201ENST00000516138 266 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 RNU6-123P-201ENST00000516163 102 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 RNU2-10P-201ENST00000516375 211 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 RNA5SP94-201ENST00000516917 108 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 RNU7-128P-201ENST00000517247 62 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 MIR4764-201ENST00000580680 88 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 AL117336.2-201ENST00000602435 335 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 RBM11P1-201ENST00000604951 799 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 AC012409.4-201ENST00000612923 249 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 AL136221.1-201ENST00000621449 509 ntBASIC-0.45□□□□□ -2.48
SIX6O95475 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 RNU6-929P-201ENST00000384429 107 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 MIR593-201ENST00000384856 100 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 MIR613-201ENST00000385248 95 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 RNU2-3P-201ENST00000410144 191 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 MED13P1-201ENST00000428342 171 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.46□□□□□ -2.48
SIX6O95475 RNU7-94P-201ENST00000459576 63 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.46□□□□□ -2.48
SIX6O95475 AC092436.3-201ENST00000511788 257 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
SIX6O95475 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.46□□□□□ -2.48
SIX6O95475 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.46□□□□□ -2.48
SIX6O95475 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.46□□□□□ -2.48
SIX6O95475 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.46□□□□□ -2.48
SIX6O95475 RNU6-371P-201ENST00000364283 108 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 RNU6-336P-201ENST00000364891 107 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 SNORA36A-201ENST00000384221 132 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 SNORA8.2-201ENST00000384372 139 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 MIR526A1-201ENST00000384897 85 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 RNA5SP127-201ENST00000411051 133 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.47□□□□□ -2.48
SIX6O95475 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.47□□□□□ -2.48
SIX6O95475 MRPS10P2-201ENST00000431226 381 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 SCARNA8-201ENST00000515924 131 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 RNA5SP330-201ENST00000517096 96 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 AC109479.2-201ENST00000517842 174 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
SIX6O95475 MIR5692A1-201ENST00000580523 69 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 AC138749.5-201ENST00000611461 208 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 AC078880.5-201ENST00000617845 421 ntBASIC-0.47□□□□□ -2.48
SIX6O95475 RNU6-833P-201ENST00000363486 107 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 RNA5SP325-201ENST00000363756 130 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 RNU4-41P-201ENST00000364426 143 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 SNORA2B-201ENST00000384583 137 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 RNU6-747P-201ENST00000390928 104 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 RNU6-241P-201ENST00000391148 104 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 AC008134.1-201ENST00000420943 193 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 AL353997.1-201ENST00000432936 108 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.48□□□□□ -2.49
SIX6O95475 HSFY5P-201ENST00000453726 309 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 AC079395.1-201ENST00000510981 262 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 MTCO3P27-201ENST00000514397 196 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.48□□□□□ -2.49
SIX6O95475 AC005562.2-201ENST00000618264 111 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 AC011155.2-201ENST00000623202 216 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 AL356596.1-201ENST00000624230 379 ntBASIC-0.48□□□□□ -2.49
SIX6O95475 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.48□□□□□ -2.49
SIX6O95475 RNU6-369P-201ENST00000362515 102 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 PCNPP3-201ENST00000393579 471 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 AC012306.1-201ENST00000423267 114 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.49□□□□□ -2.49
SIX6O95475 RNU7-57P-201ENST00000459540 60 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 MTND3P25-201ENST00000509243 135 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 RNA5SP216-201ENST00000516111 123 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 AC025647.1-201ENST00000517879 253 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.49□□□□□ -2.49
SIX6O95475 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.49□□□□□ -2.49
SIX6O95475 AC144521.1-201ENST00000607148 956 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.49□□□□□ -2.49
SIX6O95475 AP000943.4-201ENST00000622912 357 ntBASIC-0.49□□□□□ -2.49
SIX6O95475 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 RNU6-654P-201ENST00000364373 107 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 MIR643-201ENST00000385267 97 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 RNU2-59P-201ENST00000410482 191 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.5□□□□□ -2.49
SIX6O95475 MTND1P32-201ENST00000433043 938 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 AL117351.1-201ENST00000438864 766 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.5□□□□□ -2.49
SIX6O95475 AC104692.1-201ENST00000472406 90 ntBASIC-0.5□□□□□ -2.49
SIX6O95475 RNU7-99P-201ENST00000516271 62 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms