Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MIR1276-201ENST00000408707 83 ntBASIC0.67□□□□□ -2.3
VAPBO95292 RNU2-9P-201ENST00000410194 145 ntBASIC0.67□□□□□ -2.3
VAPBO95292 MTND3P9-201ENST00000429526 346 ntBASIC0.67□□□□□ -2.3
VAPBO95292 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.67□□□□□ -2.3
VAPBO95292 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.67□□□□□ -2.3
VAPBO95292 RPL39P39-201ENST00000455840 151 ntBASIC0.67□□□□□ -2.3
VAPBO95292 AC025465.4-201ENST00000513422 638 ntBASIC0.67□□□□□ -2.3
VAPBO95292 SNORD79.1-201ENST00000516069 84 ntBASIC0.67□□□□□ -2.3
VAPBO95292 Y_RNA.676-201ENST00000516393 96 ntBASIC0.67□□□□□ -2.3
VAPBO95292 AL590705.4-201ENST00000532209 134 ntBASIC0.67□□□□□ -2.3
VAPBO95292 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.67□□□□□ -2.3
VAPBO95292 AC025449.1-201ENST00000603896 529 ntBASIC0.67□□□□□ -2.3
VAPBO95292 AP001596.2-201ENST00000608410 312 ntBASIC0.67□□□□□ -2.3
VAPBO95292 AC016597.2-201ENST00000613256 341 ntBASIC0.67□□□□□ -2.3
VAPBO95292 MIR6504-201ENST00000613520 61 ntBASIC0.67□□□□□ -2.3
VAPBO95292 MIR8070-201ENST00000616510 88 ntBASIC0.67□□□□□ -2.3
VAPBO95292 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
VAPBO95292 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
VAPBO95292 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
VAPBO95292 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
VAPBO95292 RNU5B-2P-201ENST00000363036 113 ntBASIC0.66□□□□□ -2.3
VAPBO95292 SNORA25.9-201ENST00000365087 128 ntBASIC0.66□□□□□ -2.3
VAPBO95292 RNU6-282P-201ENST00000365357 103 ntBASIC0.66□□□□□ -2.3
VAPBO95292 Y_RNA.363-201ENST00000365529 113 ntBASIC0.66□□□□□ -2.3
VAPBO95292 MIR660-201ENST00000385235 97 ntBASIC0.66□□□□□ -2.3
VAPBO95292 AL031577.2-201ENST00000404133 280 ntBASIC0.66□□□□□ -2.3
VAPBO95292 BX295541.1-201ENST00000417774 250 ntBASIC0.66□□□□□ -2.3
VAPBO95292 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.66□□□□□ -2.3
VAPBO95292 RPS29P27-201ENST00000463711 170 ntBASIC0.66□□□□□ -2.3
VAPBO95292 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.66□□□□□ -2.3
VAPBO95292 RNU6-322P-201ENST00000516010 103 ntBASIC0.66□□□□□ -2.3
VAPBO95292 AC025647.1-201ENST00000517879 253 ntBASIC0.66□□□□□ -2.3
VAPBO95292 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
VAPBO95292 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.66□□□□□ -2.3
VAPBO95292 MIR5583-1-201ENST00000580941 59 ntBASIC0.66□□□□□ -2.3
VAPBO95292 AC136443.5-201ENST00000603741 370 ntBASIC0.66□□□□□ -2.3
VAPBO95292 AF246928.1-201ENST00000623768 87 ntBASIC0.66□□□□□ -2.3
VAPBO95292 RNU6-517P-201ENST00000384362 110 ntBASIC0.65□□□□□ -2.31
VAPBO95292 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
VAPBO95292 MIR499A-201ENST00000384903 122 ntBASIC0.65□□□□□ -2.31
VAPBO95292 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.65□□□□□ -2.31
VAPBO95292 RNU6-1186P-201ENST00000410429 97 ntBASIC0.65□□□□□ -2.31
VAPBO95292 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.65□□□□□ -2.31
VAPBO95292 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.65□□□□□ -2.31
VAPBO95292 HMGB1P29-201ENST00000505659 499 ntBASIC0.65□□□□□ -2.31
VAPBO95292 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.65□□□□□ -2.31
VAPBO95292 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.65□□□□□ -2.31
VAPBO95292 FAM106DP-201ENST00000586416 501 ntBASIC0.65□□□□□ -2.31
VAPBO95292 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.65□□□□□ -2.31
VAPBO95292 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
VAPBO95292 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
VAPBO95292 RNU6-199P-201ENST00000362954 107 ntBASIC0.64□□□□□ -2.31
VAPBO95292 RNU6-181P-201ENST00000363225 107 ntBASIC0.64□□□□□ -2.31
VAPBO95292 Y_RNA.123-201ENST00000363338 102 ntBASIC0.64□□□□□ -2.31
VAPBO95292 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
VAPBO95292 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VAPBO95292 AL451046.2-201ENST00000403074 277 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.64□□□□□ -2.31
VAPBO95292 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.64□□□□□ -2.31
VAPBO95292 CETN4P-201ENST00000432407 469 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC005002.2-201ENST00000438228 269 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
VAPBO95292 RNU7-94P-201ENST00000459576 63 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC007215.1-201ENST00000464893 276 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.64□□□□□ -2.31
VAPBO95292 RNU6-445P-201ENST00000516949 107 ntBASIC0.64□□□□□ -2.31
VAPBO95292 RNU1-117P-201ENST00000517041 158 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AL137100.2-201ENST00000555786 315 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC004584.2-201ENST00000570407 410 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AL357312.1-201ENST00000603879 298 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC137590.2-201ENST00000619709 240 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC022960.3-201ENST00000619794 441 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC139792.3-201ENST00000623525 224 ntBASIC0.64□□□□□ -2.31
VAPBO95292 AC008873.1-201ENST00000625051 138 ntBASIC0.64□□□□□ -2.31
VAPBO95292 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.64□□□□□ -2.31
VAPBO95292 SNORD114-22-201ENST00000365423 72 ntBASIC0.63□□□□□ -2.31
VAPBO95292 SNORA67.2-201ENST00000384300 149 ntBASIC0.63□□□□□ -2.31
VAPBO95292 RNU6-297P-201ENST00000384636 107 ntBASIC0.63□□□□□ -2.31
VAPBO95292 RNU6-903P-201ENST00000391270 109 ntBASIC0.63□□□□□ -2.31
VAPBO95292 AF228730.1-201ENST00000397972 663 ntBASIC0.63□□□□□ -2.31
VAPBO95292 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.63□□□□□ -2.31
VAPBO95292 RNU6-221P-201ENST00000459541 99 ntBASIC0.63□□□□□ -2.31
VAPBO95292 SNORD42A-201ENST00000459584 64 ntBASIC0.63□□□□□ -2.31
VAPBO95292 RNU6-232P-201ENST00000517144 64 ntBASIC0.63□□□□□ -2.31
VAPBO95292 SUB1P2-201ENST00000556401 297 ntBASIC0.63□□□□□ -2.31
VAPBO95292 CYP3A137P-201ENST00000562436 69 ntBASIC0.63□□□□□ -2.31
VAPBO95292 MIR4778-201ENST00000577635 80 ntBASIC0.63□□□□□ -2.31
VAPBO95292 AC022432.1-201ENST00000595739 310 ntBASIC0.63□□□□□ -2.31
VAPBO95292 AL390237.1-201ENST00000404226 1415 ntBASIC0.63□□□□□ -2.31
VAPBO95292 RNU6-1266P-201ENST00000362794 105 ntBASIC0.62□□□□□ -2.31
VAPBO95292 Y_RNA.191-201ENST00000363972 113 ntBASIC0.62□□□□□ -2.31
VAPBO95292 RNU6-969P-201ENST00000383900 105 ntBASIC0.62□□□□□ -2.31
VAPBO95292 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
VAPBO95292 SNORD41-201ENST00000386967 70 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.62□□□□□ -2.31
VAPBO95292 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.62□□□□□ -2.31
VAPBO95292 MTND4P32-201ENST00000437189 1237 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AL356010.1-201ENST00000456364 102 ntBASIC0.62□□□□□ -2.31
VAPBO95292 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.62□□□□□ -2.31
VAPBO95292 BET1P1-201ENST00000482276 359 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms