Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC104984.5-201ENST00000586878 94 ntBASIC1.96□□□□□ -2.1
BEST1O76090 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.96□□□□□ -2.1
BEST1O76090 AC018462.2-201ENST00000605375 395 ntBASIC1.96□□□□□ -2.1
BEST1O76090 SNORD11B-201ENST00000607707 90 ntBASIC1.96□□□□□ -2.1
BEST1O76090 AL133216.2-202ENST00000634512 349 ntBASIC1.96□□□□□ -2.1
BEST1O76090 CASC19-280ENST00000642102 1351 ntBASIC1.96□□□□□ -2.1
BEST1O76090 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
BEST1O76090 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
BEST1O76090 RNU6-1059P-201ENST00000363752 98 ntBASIC1.95□□□□□ -2.1
BEST1O76090 SNORA67.2-201ENST00000384300 149 ntBASIC1.95□□□□□ -2.1
BEST1O76090 MIR583-201ENST00000384846 75 ntBASIC1.95□□□□□ -2.1
BEST1O76090 RNU6-159P-201ENST00000391080 106 ntBASIC1.95□□□□□ -2.1
BEST1O76090 MIR548F5-201ENST00000408421 86 ntBASIC1.95□□□□□ -2.1
BEST1O76090 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.95□□□□□ -2.1
BEST1O76090 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.95□□□□□ -2.1
BEST1O76090 AC112492.4-201ENST00000456549 352 ntBASIC1.95□□□□□ -2.1
BEST1O76090 RPL23AP63-201ENST00000498752 471 ntBASIC1.95□□□□□ -2.1
BEST1O76090 AC026782.1-201ENST00000512952 449 ntBASIC1.95□□□□□ -2.1
BEST1O76090 SNORA25.14-201ENST00000516481 132 ntBASIC1.95□□□□□ -2.1
BEST1O76090 GNAI2P1-201ENST00000541815 315 ntBASIC1.95□□□□□ -2.1
BEST1O76090 MIR5094-201ENST00000578766 85 ntBASIC1.95□□□□□ -2.1
BEST1O76090 AC011494.1-201ENST00000596454 237 ntBASIC1.95□□□□□ -2.1
BEST1O76090 AL353149.1-201ENST00000610667 244 ntBASIC1.95□□□□□ -2.1
BEST1O76090 AL078596.1-201ENST00000624856 447 ntBASIC1.95□□□□□ -2.1
BEST1O76090 Y_RNA.339-201ENST00000365325 102 ntBASIC1.94□□□□□ -2.1
BEST1O76090 FGF7P8-201ENST00000402994 292 ntBASIC1.94□□□□□ -2.1
BEST1O76090 AC060773.1-201ENST00000421698 310 ntBASIC1.94□□□□□ -2.1
BEST1O76090 MTND1P2-201ENST00000430604 821 ntBASIC1.94□□□□□ -2.1
BEST1O76090 RPS3AP52-201ENST00000435639 297 ntBASIC1.94□□□□□ -2.1
BEST1O76090 HMGB1P18-201ENST00000438801 619 ntBASIC1.94□□□□□ -2.1
BEST1O76090 AC007677.1-201ENST00000445757 515 ntBASIC1.94□□□□□ -2.1
BEST1O76090 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.94□□□□□ -2.1
BEST1O76090 AC011406.1-201ENST00000512440 370 ntBASIC1.94□□□□□ -2.1
BEST1O76090 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.94□□□□□ -2.1
BEST1O76090 AP003033.1-201ENST00000527244 415 ntBASIC1.94□□□□□ -2.1
BEST1O76090 AC005668.1-201ENST00000571142 476 ntBASIC1.94□□□□□ -2.1
BEST1O76090 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.94□□□□□ -2.1
BEST1O76090 AC069114.2-201ENST00000604699 304 ntBASIC1.94□□□□□ -2.1
BEST1O76090 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
BEST1O76090 Y_RNA.279-201ENST00000364763 95 ntBASIC1.93□□□□□ -2.1
BEST1O76090 Y_RNA.405-201ENST00000383979 100 ntBASIC1.93□□□□□ -2.1
BEST1O76090 Y_RNA.451-201ENST00000384200 100 ntBASIC1.93□□□□□ -2.1
BEST1O76090 Y_RNA.482-201ENST00000384377 111 ntBASIC1.93□□□□□ -2.1
BEST1O76090 Y_RNA.524-201ENST00000384564 100 ntBASIC1.93□□□□□ -2.1
BEST1O76090 Y_RNA.561-201ENST00000384694 100 ntBASIC1.93□□□□□ -2.1
BEST1O76090 RNU6-1050P-201ENST00000410388 107 ntBASIC1.93□□□□□ -2.1
BEST1O76090 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
BEST1O76090 RPL37P10-201ENST00000412884 288 ntBASIC1.93□□□□□ -2.1
BEST1O76090 AC016717.1-201ENST00000448918 286 ntBASIC1.93□□□□□ -2.1
BEST1O76090 RNU7-57P-201ENST00000459540 60 ntBASIC1.93□□□□□ -2.1
BEST1O76090 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.93□□□□□ -2.1
BEST1O76090 RNU6-1041P-201ENST00000516254 102 ntBASIC1.93□□□□□ -2.1
BEST1O76090 RNU7-30P-201ENST00000516835 62 ntBASIC1.93□□□□□ -2.1
BEST1O76090 SNORA44.1-201ENST00000517031 108 ntBASIC1.93□□□□□ -2.1
BEST1O76090 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
BEST1O76090 AC100812.1-201ENST00000607622 580 ntBASIC1.93□□□□□ -2.1
BEST1O76090 AC098657.3-201ENST00000620434 263 ntBASIC1.93□□□□□ -2.1
BEST1O76090 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.93□□□□□ -2.1
BEST1O76090 MTND4P1-201ENST00000457501 1466 ntBASIC1.93□□□□□ -2.1
BEST1O76090 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
BEST1O76090 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
BEST1O76090 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
BEST1O76090 RNU6-845P-201ENST00000362578 103 ntBASIC1.92□□□□□ -2.1
BEST1O76090 RNU6-862P-201ENST00000362804 105 ntBASIC1.92□□□□□ -2.1
BEST1O76090 RNU6-112P-201ENST00000363599 104 ntBASIC1.92□□□□□ -2.1
BEST1O76090 Y_RNA.160-201ENST00000363677 92 ntBASIC1.92□□□□□ -2.1
BEST1O76090 RNU6-873P-201ENST00000363833 107 ntBASIC1.92□□□□□ -2.1
BEST1O76090 SNORA26.9-201ENST00000391322 122 ntBASIC1.92□□□□□ -2.1
BEST1O76090 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
BEST1O76090 AC099677.2-201ENST00000436385 175 ntBASIC1.92□□□□□ -2.1
BEST1O76090 NDUFB4P10-201ENST00000452541 359 ntBASIC1.92□□□□□ -2.1
BEST1O76090 RPL31P58-201ENST00000469001 379 ntBASIC1.92□□□□□ -2.1
BEST1O76090 AC010409.1-201ENST00000487382 476 ntBASIC1.92□□□□□ -2.1
BEST1O76090 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.92□□□□□ -2.1
BEST1O76090 RNU6-1146P-201ENST00000516282 102 ntBASIC1.92□□□□□ -2.1
BEST1O76090 RNA5SP384-201ENST00000516615 116 ntBASIC1.92□□□□□ -2.1
BEST1O76090 Y_RNA.706-201ENST00000516933 99 ntBASIC1.92□□□□□ -2.1
BEST1O76090 Y_RNA.708-201ENST00000516950 96 ntBASIC1.92□□□□□ -2.1
BEST1O76090 AL121579.1-201ENST00000555129 305 ntBASIC1.92□□□□□ -2.1
BEST1O76090 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.92□□□□□ -2.1
BEST1O76090 AC068205.3-201ENST00000636385 468 ntBASIC1.92□□□□□ -2.1
BEST1O76090 MTND4P12-201ENST00000498999 1377 ntBASIC1.92□□□□□ -2.1
BEST1O76090 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
BEST1O76090 Y_RNA.166-201ENST00000363730 102 ntBASIC1.91□□□□□ -2.1
BEST1O76090 RNU1-96P-201ENST00000364163 162 ntBASIC1.91□□□□□ -2.1
BEST1O76090 RNU6-1019P-201ENST00000364424 107 ntBASIC1.91□□□□□ -2.1
BEST1O76090 RNU6-601P-201ENST00000384540 107 ntBASIC1.91□□□□□ -2.1
BEST1O76090 MT-TL1-201ENST00000386347 75 ntBASIC1.91□□□□□ -2.1
BEST1O76090 AL117342.1-201ENST00000404861 406 ntBASIC1.91□□□□□ -2.1
BEST1O76090 Y_RNA.594-201ENST00000410373 140 ntBASIC1.91□□□□□ -2.1
BEST1O76090 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
BEST1O76090 RPL21P111-201ENST00000418453 477 ntBASIC1.91□□□□□ -2.1
BEST1O76090 EBAG9P1-201ENST00000418955 543 ntBASIC1.91□□□□□ -2.1
BEST1O76090 CST2P1-201ENST00000425770 87 ntBASIC1.91□□□□□ -2.1
BEST1O76090 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.91□□□□□ -2.1
BEST1O76090 AC107393.1-201ENST00000512403 346 ntBASIC1.91□□□□□ -2.1
BEST1O76090 RNU1-117P-201ENST00000517041 158 ntBASIC1.91□□□□□ -2.1
BEST1O76090 CBX3P8-201ENST00000532412 525 ntBASIC1.91□□□□□ -2.1
BEST1O76090 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.91□□□□□ -2.1
BEST1O76090 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms