Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SNAP23P1-201ENST00000433229 246 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC109329.1-201ENST00000518744 317 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC124293.1-201ENST00000530034 493 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AL391840.1-201ENST00000571144 367 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 FGF7P1-201ENST00000582820 288 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU6-156P-201ENST00000621869 107 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC007490.1-201ENST00000624321 703 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 SNORA2.1-201ENST00000363089 137 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 SNORD113.3-201ENST00000364630 78 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNY1P2-201ENST00000364820 117 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU6-205P-201ENST00000390858 107 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNA5SP323-201ENST00000391094 133 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU6-754P-201ENST00000391166 107 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC002486.1-201ENST00000435098 391 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 UQCRBP2-201ENST00000447827 297 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.41□□□□□ -2.48
USH2AO75445 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.41□□□□□ -2.48
USH2AO75445 AL121652.1-201ENST00000608851 448 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC087683.2-201ENST00000611384 326 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC017104.5-201ENST00000637647 639 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU6-487P-201ENST00000365430 104 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RNU6-128P-201ENST00000383976 107 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RNU6-432P-201ENST00000384196 109 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.42□□□□□ -2.48
USH2AO75445 AC069271.1-201ENST00000445577 156 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 AC104073.1-201ENST00000451988 151 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 SUB1P2-201ENST00000556401 297 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 Z99289.3-201ENST00000605586 594 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 MIR487A-201ENST00000385009 80 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 USP9YP11-201ENST00000427537 717 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 TXNL1P1-201ENST00000429528 554 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 AL445193.1-201ENST00000441183 141 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.42□□□□□ -2.48
USH2AO75445 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RNA5SP94-201ENST00000516917 108 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RBM11P1-201ENST00000604951 799 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RNU6-263P-201ENST00000363811 107 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RNA5SP475-201ENST00000410568 110 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RNU2-48P-201ENST00000410694 191 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.42□□□□□ -2.48
USH2AO75445 AC022137.1-201ENST00000483735 151 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 AL590396.2-201ENST00000636511 1041 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.42□□□□□ -2.48
USH2AO75445 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 RNU4-61P-201ENST00000411243 107 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.42□□□□□ -2.48
USH2AO75445 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.42□□□□□ -2.48
USH2AO75445 MIR4748-201ENST00000578076 82 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 MIR5706-201ENST00000579841 80 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 AL442067.1-201ENST00000613261 223 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 MIR6818-201ENST00000621576 65 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 SCARNA4-201ENST00000629045 128 ntBASIC-0.42□□□□□ -2.48
USH2AO75445 AC099786.3-201ENST00000565735 1410 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AC243428.1-201ENST00000421099 264 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.43□□□□□ -2.48
USH2AO75445 AC007327.1-201ENST00000447461 264 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 SEPT14P17-201ENST00000617978 177 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 MIR6755-201ENST00000619993 66 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 MIR517B-201ENST00000385102 67 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 RPL21P38-201ENST00000418090 167 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.43□□□□□ -2.48
USH2AO75445 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.43□□□□□ -2.48
USH2AO75445 SNRPEP8-201ENST00000442866 260 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.43□□□□□ -2.48
USH2AO75445 BTF3P15-201ENST00000455606 336 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.43□□□□□ -2.48
USH2AO75445 RNU6-966P-201ENST00000516479 104 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 TPRKBP2-201ENST00000565969 475 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.43□□□□□ -2.48
USH2AO75445 AC004908.3-201ENST00000610248 625 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AL356094.1-201ENST00000624663 1212 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.43□□□□□ -2.48
USH2AO75445 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
USH2AO75445 MIR135A2-201ENST00000384854 100 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 TAF13P2-201ENST00000416876 286 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AC244250.2-201ENST00000418731 148 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 ZNF885P-201ENST00000420174 1098 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.43□□□□□ -2.48
USH2AO75445 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.43□□□□□ -2.48
USH2AO75445 MRPS17P3-201ENST00000465453 385 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 OR9P1P-201ENST00000496431 281 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 MIR6514-201ENST00000622549 70 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 RNU6-23P-201ENST00000363283 107 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.43□□□□□ -2.48
USH2AO75445 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.43□□□□□ -2.48
USH2AO75445 RPL39P39-201ENST00000455840 151 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 RNU1-86P-201ENST00000516108 154 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 RNU1-107P-201ENST00000516617 154 ntBASIC-0.43□□□□□ -2.48
USH2AO75445 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.43□□□□□ -2.48
USH2AO75445 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.44□□□□□ -2.48
USH2AO75445 RNU6-486P-201ENST00000363116 107 ntBASIC-0.44□□□□□ -2.48
USH2AO75445 RNA5SP493-201ENST00000364115 91 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms