Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS4BO75351 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS4BO75351 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 MIR410-201ENST00000362222 80 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 SNORD81.1-201ENST00000363064 77 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 Y_RNA.230-201ENST00000364348 109 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 RNU6-926P-201ENST00000384075 107 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 MIR215-201ENST00000384858 110 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 RNU2-25P-201ENST00000411041 191 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 ELOCP21-201ENST00000412558 336 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS4BO75351 CBX3P6-201ENST00000430257 527 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AL139132.1-201ENST00000431587 344 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AC009237.7-201ENST00000447357 229 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AC073901.1-201ENST00000462471 408 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 UBL5P3-201ENST00000475112 231 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS4BO75351 AC018630.3-201ENST00000542637 96 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AC110588.1-201ENST00000559699 137 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS4BO75351 AP001282.2-201ENST00000616149 309 ntBASIC2.77□□□□□ -1.97
VPS4BO75351 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS4BO75351 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS4BO75351 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS4BO75351 MIR335-201ENST00000362173 94 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 Y_RNA.188-201ENST00000363952 111 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 SNORA67.2-201ENST00000384300 149 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 RNU6-937P-201ENST00000384325 106 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 MIR196B-201ENST00000384852 84 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 RNU5A-5P-201ENST00000411054 116 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 IFNA11P-201ENST00000446352 526 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 TRBVB-201ENST00000477100 408 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 RPS27AP9-201ENST00000477681 438 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 RNU6-237P-201ENST00000515985 71 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 RNU6-496P-201ENST00000516145 99 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS4BO75351 AC127459.3-201ENST00000624328 466 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS4BO75351 AC010615.1-201ENST00000594254 1764 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 AC080128.1-201ENST00000474389 1917 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 AL161431.1-201ENST00000618966 4205 ntBASIC2.76□□□□□ -1.97
VPS4BO75351 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS4BO75351 AC062016.1-201ENST00000355719 319 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 RNU6-626P-201ENST00000363354 107 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 Y_RNA.570-201ENST00000384750 101 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 MIR95-201ENST00000385072 81 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 SNORA12-201ENST00000391162 147 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 RNA5SP504-201ENST00000410676 117 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS4BO75351 AC096920.1-201ENST00000423991 241 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 AC027124.2-201ENST00000428249 105 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 AC004386.2-201ENST00000441858 148 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 RNU6-1132P-201ENST00000459214 107 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 RPS29P26-201ENST00000477483 171 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 RN7SL499P-201ENST00000481141 276 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS4BO75351 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS4BO75351 RRN3P3-201ENST00000549207 578 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS4BO75351 AC018448.1-201ENST00000552843 316 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS4BO75351 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS4BO75351 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS4BO75351 AC105245.1-201ENST00000581934 244 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
VPS4BO75351 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS4BO75351 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.75□□□□□ -1.97
VPS4BO75351 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS4BO75351 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS4BO75351 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS4BO75351 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VPS4BO75351 Y_RNA.14-201ENST00000362415 103 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 Y_RNA.307-201ENST00000365022 117 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 SNORA18.2-201ENST00000383865 132 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 RNU6-20P-201ENST00000384106 107 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 RNU6-1274P-201ENST00000384557 107 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 FO393413.1-201ENST00000402892 195 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS4BO75351 AL390729.2-201ENST00000416137 156 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 AL513477.1-202ENST00000417061 214 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 AC140059.1-201ENST00000489238 361 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 RNU2-44P-201ENST00000516795 194 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 AC091544.4-201ENST00000555268 342 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS4BO75351 AL670379.2-201ENST00000604983 252 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 AC069294.1-201ENST00000608397 350 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS4BO75351 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS4BO75351 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VPS4BO75351 AC092593.1-201ENST00000515413 1815 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.74□□□□□ -1.97
VPS4BO75351 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VPS4BO75351 SNORD113-8-201ENST00000363497 74 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 MIR592-201ENST00000384959 97 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 RNU2-20P-201ENST00000410425 191 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 Y_RNA.597-201ENST00000410463 100 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AC087499.2-201ENST00000432861 149 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms