Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA3O60609 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.12□□□□□ -1.75
GFRA3O60609 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA3O60609 RNU6-471P-201ENST00000383944 106 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 RNA5SP246-201ENST00000458909 119 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 RNU6-221P-201ENST00000459541 99 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 RN7SL601P-201ENST00000471221 293 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 AC104619.4-201ENST00000510773 249 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
GFRA3O60609 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.12□□□□□ -1.75
GFRA3O60609 MIR4512-201ENST00000583257 77 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 MIR3936-201ENST00000584304 110 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 MIR3922-201ENST00000585192 84 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 RNU6-86P-201ENST00000606534 107 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA3O60609 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
GFRA3O60609 AC005336.3-201ENST00000623833 2679 ntBASIC4.12□□□□□ -1.75
GFRA3O60609 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.12□□□□□ -1.75
GFRA3O60609 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA3O60609 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA3O60609 RNU6-884P-201ENST00000363889 107 ntBASIC4.11□□□□□ -1.75
GFRA3O60609 AL513477.1-202ENST00000417061 214 ntBASIC4.11□□□□□ -1.75
GFRA3O60609 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
GFRA3O60609 HMGN2P10-201ENST00000448085 265 ntBASIC4.11□□□□□ -1.75
GFRA3O60609 RPS27AP10-201ENST00000496103 208 ntBASIC4.11□□□□□ -1.75
GFRA3O60609 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.11□□□□□ -1.75
GFRA3O60609 PPBPP1-201ENST00000510807 373 ntBASIC4.11□□□□□ -1.75
GFRA3O60609 AC004812.1-201ENST00000540773 146 ntBASIC4.11□□□□□ -1.75
GFRA3O60609 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.11□□□□□ -1.75
GFRA3O60609 MIR4716-201ENST00000579628 84 ntBASIC4.11□□□□□ -1.75
GFRA3O60609 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA3O60609 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA3O60609 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA3O60609 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA3O60609 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA3O60609 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA3O60609 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA3O60609 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
GFRA3O60609 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 PCAT14-202ENST00000627127 3935 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
GFRA3O60609 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.1□□□□□ -1.75
GFRA3O60609 Z82217.1-201ENST00000625157 8149 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 RNU1-20P-201ENST00000363314 162 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 RNA5SP235-201ENST00000365411 114 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 RNU6-800P-201ENST00000384473 103 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GFRA3O60609 RPL31P63-201ENST00000422565 375 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 RNU6-513P-201ENST00000516104 104 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.1□□□□□ -1.75
GFRA3O60609 AC096720.1-201ENST00000604441 183 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 AC006435.5-201ENST00000624486 112 ntBASIC4.1□□□□□ -1.75
GFRA3O60609 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.1□□□□□ -1.75
GFRA3O60609 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.1□□□□□ -1.75
GFRA3O60609 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA3O60609 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
GFRA3O60609 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA3O60609 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA3O60609 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA3O60609 RNU6-1313P-201ENST00000362622 102 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 RNU6-249P-201ENST00000363016 102 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 AL035423.1-201ENST00000420331 213 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 AC090844.1-201ENST00000422019 156 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 PTMAP3-201ENST00000447474 330 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 AL450471.1-201ENST00000447509 127 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 RNU6-634P-201ENST00000459134 106 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 snoU13.14-201ENST00000459372 104 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 AC010401.1-201ENST00000463867 348 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 AC106707.2-201ENST00000484182 374 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 SNORA31.20-201ENST00000517111 133 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.09□□□□□ -1.75
GFRA3O60609 MIR376B-201ENST00000614515 100 ntBASIC4.09□□□□□ -1.75
GFRA3O60609 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
GFRA3O60609 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.09□□□□□ -1.75
GFRA3O60609 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA3O60609 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA3O60609 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.09□□□□□ -1.76
GFRA3O60609 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.09□□□□□ -1.76
GFRA3O60609 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
GFRA3O60609 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
GFRA3O60609 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
GFRA3O60609 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA3O60609 AL672167.1-203ENST00000641299 2975 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA3O60609 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.08□□□□□ -1.76
GFRA3O60609 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA3O60609 RNU1-22P-201ENST00000363334 158 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA3O60609 Y_RNA.440-201ENST00000384120 114 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms