Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPS29P30-201ENST00000600975 111 ntBASIC2.12□□□□□ -2.07
PRKNO60260 AL137847.3-201ENST00000611521 109 ntBASIC2.12□□□□□ -2.07
PRKNO60260 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.12□□□□□ -2.07
PRKNO60260 Z82209.1-201ENST00000422141 2135 ntBASIC2.12□□□□□ -2.07
PRKNO60260 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PRKNO60260 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PRKNO60260 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
PRKNO60260 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PRKNO60260 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PRKNO60260 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
PRKNO60260 RNU6-1301P-201ENST00000362724 104 ntBASIC2.11□□□□□ -2.07
PRKNO60260 RNU6-280P-201ENST00000364145 104 ntBASIC2.11□□□□□ -2.07
PRKNO60260 RNU6-281P-201ENST00000384212 103 ntBASIC2.11□□□□□ -2.07
PRKNO60260 Y_RNA.459-201ENST00000384251 102 ntBASIC2.11□□□□□ -2.07
PRKNO60260 RNU6-318P-201ENST00000384283 103 ntBASIC2.11□□□□□ -2.07
PRKNO60260 RNU6-1001P-201ENST00000411265 100 ntBASIC2.11□□□□□ -2.07
PRKNO60260 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.11□□□□□ -2.07
PRKNO60260 MTND3P2-201ENST00000438452 342 ntBASIC2.11□□□□□ -2.07
PRKNO60260 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.11□□□□□ -2.07
PRKNO60260 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.11□□□□□ -2.07
PRKNO60260 RNU1-41P-201ENST00000516161 162 ntBASIC2.11□□□□□ -2.07
PRKNO60260 RNU1-48P-201ENST00000516400 162 ntBASIC2.11□□□□□ -2.07
PRKNO60260 Y_RNA.721-201ENST00000517207 102 ntBASIC2.11□□□□□ -2.07
PRKNO60260 DEFB131C-201ENST00000528817 165 ntBASIC2.11□□□□□ -2.07
PRKNO60260 AP002770.2-201ENST00000543613 532 ntBASIC2.11□□□□□ -2.07
PRKNO60260 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.11□□□□□ -2.07
PRKNO60260 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.11□□□□□ -2.07
PRKNO60260 SNRPGP20-201ENST00000604477 205 ntBASIC2.11□□□□□ -2.07
PRKNO60260 AC005562.2-201ENST00000618264 111 ntBASIC2.11□□□□□ -2.07
PRKNO60260 AC008121.3-201ENST00000618726 433 ntBASIC2.11□□□□□ -2.07
PRKNO60260 BX322639.1-202ENST00000423987 2213 ntBASIC2.11□□□□□ -2.07
PRKNO60260 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PRKNO60260 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.1□□□□□ -2.07
PRKNO60260 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.1□□□□□ -2.07
PRKNO60260 Y_RNA.27-201ENST00000362540 103 ntBASIC2.1□□□□□ -2.07
PRKNO60260 SNORD32B-201ENST00000364460 84 ntBASIC2.1□□□□□ -2.07
PRKNO60260 RNU1-91P-201ENST00000364746 163 ntBASIC2.1□□□□□ -2.07
PRKNO60260 RNA5SP125-201ENST00000364843 120 ntBASIC2.1□□□□□ -2.07
PRKNO60260 RNU6-926P-201ENST00000384075 107 ntBASIC2.1□□□□□ -2.07
PRKNO60260 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
PRKNO60260 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PRKNO60260 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.1□□□□□ -2.07
PRKNO60260 AL358176.2-201ENST00000425769 204 ntBASIC2.1□□□□□ -2.07
PRKNO60260 AL161788.1-201ENST00000441805 169 ntBASIC2.1□□□□□ -2.07
PRKNO60260 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.1□□□□□ -2.07
PRKNO60260 RNU6-965P-201ENST00000516721 96 ntBASIC2.1□□□□□ -2.07
PRKNO60260 AC022616.4-201ENST00000522985 181 ntBASIC2.1□□□□□ -2.07
PRKNO60260 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.1□□□□□ -2.07
PRKNO60260 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.1□□□□□ -2.07
PRKNO60260 AC113195.1-201ENST00000579952 141 ntBASIC2.1□□□□□ -2.07
PRKNO60260 MIR5006-201ENST00000583027 110 ntBASIC2.1□□□□□ -2.07
PRKNO60260 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.1□□□□□ -2.07
PRKNO60260 MIR6766-201ENST00000622641 72 ntBASIC2.1□□□□□ -2.07
PRKNO60260 U6.92-201ENST00000636464 89 ntBASIC2.1□□□□□ -2.07
PRKNO60260 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.1□□□□□ -2.07
PRKNO60260 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PRKNO60260 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PRKNO60260 RNU1-23P-201ENST00000363361 144 ntBASIC2.09□□□□□ -2.07
PRKNO60260 RNU6-727P-201ENST00000363592 107 ntBASIC2.09□□□□□ -2.07
PRKNO60260 RNY3P4-201ENST00000384428 101 ntBASIC2.09□□□□□ -2.07
PRKNO60260 Y_RNA.526-201ENST00000384572 110 ntBASIC2.09□□□□□ -2.07
PRKNO60260 RNU6-1105P-201ENST00000384774 107 ntBASIC2.09□□□□□ -2.07
PRKNO60260 MIR320B2-201ENST00000408479 138 ntBASIC2.09□□□□□ -2.07
PRKNO60260 MIR1294-201ENST00000408503 142 ntBASIC2.09□□□□□ -2.07
PRKNO60260 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
PRKNO60260 RNU2-63P-201ENST00000410792 194 ntBASIC2.09□□□□□ -2.07
PRKNO60260 CR769767.1-201ENST00000436337 346 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AC004386.2-201ENST00000441858 148 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AC010095.1-201ENST00000443543 144 ntBASIC2.09□□□□□ -2.07
PRKNO60260 CYP2C59P-201ENST00000457790 269 ntBASIC2.09□□□□□ -2.07
PRKNO60260 MTATP8P1-201ENST00000467115 207 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AC010469.2-201ENST00000496412 480 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AC093852.1-201ENST00000503587 266 ntBASIC2.09□□□□□ -2.07
PRKNO60260 RNU2-44P-201ENST00000516795 194 ntBASIC2.09□□□□□ -2.07
PRKNO60260 Y_RNA.715-201ENST00000517082 110 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.09□□□□□ -2.07
PRKNO60260 AC026470.2-201ENST00000561492 181 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.09□□□□□ -2.07
PRKNO60260 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.09□□□□□ -2.07
PRKNO60260 AL390123.1-201ENST00000603216 237 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AC010999.1-201ENST00000611856 324 ntBASIC2.09□□□□□ -2.07
PRKNO60260 TCL6_2.1-201ENST00000615162 119 ntBASIC2.09□□□□□ -2.07
PRKNO60260 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.09□□□□□ -2.07
PRKNO60260 AL078596.1-201ENST00000624856 447 ntBASIC2.09□□□□□ -2.07
PRKNO60260 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PRKNO60260 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PRKNO60260 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PRKNO60260 MIR6073-201ENST00000352083 89 ntBASIC2.08□□□□□ -2.08
PRKNO60260 RNA5SP432-201ENST00000362480 116 ntBASIC2.08□□□□□ -2.08
PRKNO60260 RNU6-1309P-201ENST00000363305 108 ntBASIC2.08□□□□□ -2.08
PRKNO60260 Y_RNA.133-201ENST00000363428 110 ntBASIC2.08□□□□□ -2.08
PRKNO60260 Y_RNA.144-201ENST00000363521 113 ntBASIC2.08□□□□□ -2.08
PRKNO60260 Y_RNA.153-201ENST00000363615 91 ntBASIC2.08□□□□□ -2.08
PRKNO60260 RNU4-50P-201ENST00000364361 141 ntBASIC2.08□□□□□ -2.08
PRKNO60260 RNA5SP240-201ENST00000365355 128 ntBASIC2.08□□□□□ -2.08
PRKNO60260 RNU6-245P-201ENST00000384020 107 ntBASIC2.08□□□□□ -2.08
PRKNO60260 Y_RNA.471-201ENST00000384312 102 ntBASIC2.08□□□□□ -2.08
PRKNO60260 SNORA67.3-201ENST00000384366 140 ntBASIC2.08□□□□□ -2.08
PRKNO60260 MIR548F4-201ENST00000408515 105 ntBASIC2.08□□□□□ -2.08
PRKNO60260 SNORD12B-201ENST00000410433 91 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms